# Scverse community meetings

**URL:** <https://discourse.scverse.org/t/scverse-community-meetings/1092>\
**Category:** Announcements\
**Created:** [February 1, 2023, 4:55pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092 "2023-02-01T16:55:10Z")\
**Posts on this page:** 7\
**Page:** 1

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**Author:** ![ivirshup](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/ivirshup/32/160_2.png) [@ivirshup](https://discourse.scverse.org/u/ivirshup)\
**Post date:** [February 1, 2023, 4:55pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/1 "2023-02-01T16:55:10Z")

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Hey all!

We’re going to start our (long promised) scverse community meetings next week! They will be at 2023-02-06T23:00:00Z and repeat every other week.

Some links:

- [Calendar event](https://calendar.google.com/calendar/event?eid=bWFiM25mM3VuNWYzazBhZWY4bm1nbWhzMmdfMjAyMzAyMDdUMTcwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn) | [ics file](https://discourse.scverse.org/user_uploads/41224/f2muRqExtnqawBNeAMlbAudd/iCal-20230201-173720.ics)
- [Meeting notes and agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ)

It’s open for the community to join. Probable topics include:

- Ecosystem package development
- Scverse events
- And scverse development

Looking forward to seeing people there!

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**Author:** ![ivirshup](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/ivirshup/32/160_2.png) [@ivirshup](https://discourse.scverse.org/u/ivirshup)\
**Post date:** [February 1, 2023, 4:57pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/2 "2023-02-01T16:57:18Z")

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**Author:** ![grst](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/grst/32/17_2.png) [@grst](https://discourse.scverse.org/u/grst)\
**Post date:** [March 20, 2023, 7:01pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/3 "2023-03-20T19:01:47Z")

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Tomorrow at 2023-03-21 18:00 CET will be another community meeting!

This time, _Clarence Mah_ is going to give a flash talk about [bento tools](https://github.com/ckmah/bento-tools), a scverse ecosystem package for spatial analysis at subcellular resolution. After that, there will be plenty of time for discussion and chatting with other community members.

Everyone is welcome to join!

[Notes/Agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ?edit) | [Calendar invite](https://calendar.google.com/calendar/event?action=TEMPLATE&tmeid=bWFiM25mM3VuNWYzazBhZWY4bm1nbWhzMmdfMjAyMzAyMjFUMTcwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn&tmsrc=too9rvsq0u828v47bt2jmau8gk%40group.calendar.google.com&scp=ALL) | [Zoom link](https://zoom.us/j/94079118063?pwd=bjhEaEpUUllCTUVSK0VTS2g0M3NQZz09)

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<div class="post-metadata">

**Author:** ![grst](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/grst/32/17_2.png) [@grst](https://discourse.scverse.org/u/grst)\
**Post date:** [April 3, 2023, 6:17am UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/4 "2023-04-03T06:17:40Z")

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Tomorrow, 2023-04-04 at 18:00 CEST there will be another open community meeting!

This time, _Mikaela Koutrouli_ is going to give a flash talk about [FAVA](https://github.com/mikelkou/fava), an ecosystem package to reconstruct protein-protein interaction networks from single-cell data using variational autoencoders.  
As usual, there will be time for informal discussion about anything scverse-related afterwards.

Everyone is welcome to join!

[Notes/Agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ?edit) | [Calendar invite](https://calendar.google.com/calendar/event?action=TEMPLATE&tmeid=bWFiM25mM3VuNWYzazBhZWY4bm1nbWhzMmdfMjAyMzAyMjFUMTcwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn&tmsrc=too9rvsq0u828v47bt2jmau8gk%40group.calendar.google.com&scp=ALL) | [Zoom link](https://zoom.us/j/94079118063?pwd=bjhEaEpUUllCTUVSK0VTS2g0M3NQZz09)

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<div class="post-metadata">

**Author:** ![grst](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/grst/32/17_2.png) [@grst](https://discourse.scverse.org/u/grst)\
**Post date:** [April 13, 2023, 6:54am UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/5 "2023-04-13T06:54:48Z")

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Next meeting 2023-04-18 18:00 CEST will be about **Genomic Ranges support in AnnData**.

Please come and tell us about your use-cases if you are working with ranged data!

[Notes/Agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ?edit) | [Calendar invite](https://calendar.google.com/calendar/event?action=TEMPLATE&tmeid=bWFiM25mM3VuNWYzazBhZWY4bm1nbWhzMmdfMjAyMzAyMjFUMTcwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn&tmsrc=too9rvsq0u828v47bt2jmau8gk%40group.calendar.google.com&scp=ALL) | [Zoom link](https://zoom.us/j/94079118063?pwd=bjhEaEpUUllCTUVSK0VTS2g0M3NQZz09)

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<div class="post-metadata">

**Author:** ![ivirshup](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/ivirshup/32/160_2.png) [@ivirshup](https://discourse.scverse.org/u/ivirshup)\
**Post date:** [May 28, 2023, 10:52pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/6 "2023-05-28T22:52:51Z")

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For our next community meeting, there will be a presentation on the SpatialData framework for processing spatial omics data! This will be at 2023-05-30T16:00:00Z→2023-05-30T17:00:00Z (6PM CEST). Looking forward to seeing everyone there!

For more information on SpatialData, check out the [twitter thread](https://twitter.com/LucaMarconato2/status/1656239450131660800?s=20), [docs](https://spatialdata.scverse.org/en/latest/), and [preprint](https://www.biorxiv.org/content/10.1101/2023.05.05.539647v1).

- [Meeting notes/ agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ?view#2023-05-30)
- [Calendar event](https://calendar.google.com/calendar/event?action=TEMPLATE&tmeid=NzViZ2lobGg2Y25tcXZlbzVoMGxxbWgwc3RfMjAyMzA1MzBUMTYwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn&tmsrc=too9rvsq0u828v47bt2jmau8gk%40group.calendar.google.com&scp=ALL)
- [Zoom](https://zoom.us/j/94079118063?pwd=bjhEaEpUUllCTUVSK0VTS2g0M3NQZz09)

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<div class="post-metadata">

**Author:** ![mikelkou](https://yyz1.discourse-cdn.com/flex035/user_avatar/discourse.scverse.org/mikelkou/32/677_2.png) [@mikelkou](https://discourse.scverse.org/u/mikelkou)\
**Post date:** [June 12, 2023, 4:06pm UTC](https://discourse.scverse.org/t/scverse-community-meetings/1092/7 "2023-06-12T16:06:08Z")

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Next Tuesday at 2023-06-13 18:00 CET will be another community meeting!

For our next community meeting, **Pau Badia-i-Mompel** will talk about **pseudobulk and differential expression analysis**! Looking forward to seeing everyone there!

Everyone is welcome to join!

For more information on [Best practices for single-cell analysis across modalities](https://www.nature.com/articles/s41576-023-00586-w#Abs1) and [decoupler](http://decoupler-py.readthedocs.io/)

- [Meeting notes/ agenda](https://hackmd.io/VfVLKb3ETGKN2j_7tn8ZJQ?view#2023-05-30)
- [Calendar event](https://calendar.google.com/calendar/event?action=TEMPLATE&tmeid=NzViZ2lobGg2Y25tcXZlbzVoMGxxbWgwc3RfMjAyMzA1MzBUMTYwMDAwWiB0b285cnZzcTB1ODI4djQ3YnQyam1hdThna0Bn&tmsrc=too9rvsq0u828v47bt2jmau8gk%40group.calendar.google.com&scp=ALL)
- [Zoom](https://zoom.us/j/94079118063?pwd=bjhEaEpUUllCTUVSK0VTS2g0M3NQZz09)