using anaconda enviornment (base root) → jupyter
Python code:
!pip3 install scvi-tools
output:
successful
import scvi
output:
Global seed set to 0
/Users/opt/anaconda3/lib/python3.9/site-packages/pytorch_lightning/utilities/warnings.py:53: LightningDeprecationWarning: pytorch_lightning.utilities.warnings.rank_zero_deprecation has been deprecated in v1.6 and will be removed in v1.8. Use the equivalent function from the pytorch_lightning.utilities.rank_zero module instead.
new_rank_zero_deprecation(
/Users/opt/anaconda3/lib/python3.9/site-packages/pytorch_lightning/utilities/warnings.py:58: LightningDeprecationWarning: The pytorch_lightning.loggers.base.rank_zero_experiment is deprecated in v1.7 and will be removed in v1.9. Please use pytorch_lightning.loggers.logger.rank_zero_experiment instead.
return new_rank_zero_deprecation(*args, **kwargs)
Model = scvi.model.scvi.load(‘model.model’,adata)
output:
AttributeError Traceback (most recent call last)
/var/folders/mc/hj0njpys5y532ylfj7_qkzsw0000gn/T/ipykernel_71657/3188852405.py in
I’m confused on how to fix this error.
Thank you