Latest scvi-tools topics

Topic	Replies	Views	Activity
About the scvi-tools category For questions about using scvi-tools.	0	1263	October 19, 2020
Request for an end-to-end ResolVI tutorial on Visium HD cell segmentation data	2	37	October 11, 2026
Can scVI take as input SCT-normalized data? integration , scvi	2	108	September 8, 2026
How to install solo-sc or use hashsolo from scvi?	5	954	August 18, 2026
Allowed downstream analysis with get_normalized_expression? integration , scvi	6	220	July 30, 2026
Within-individual DE/DA with MrVI	1	57	July 15, 2026
SCVI view_anndata_setup causes AttributeError with rich.pretty integration , scvi	1	67	July 8, 2026
mrVI and groupby=None	2	88	June 25, 2026
Choosing number of latent variables	3	120	May 26, 2026
Getting normalized expression integration , diff-exp , scvi	13	346	May 13, 2026
Using curated marker genes together with HVGs for scVI feature selection in adult skeletal muscle snRNA-seq	1	78	May 12, 2026
Using ResolVI’s Unsupervised Mode for Cell Annotation	9	747	May 7, 2026
Integration challenges in a multi-dataset single cell type maturation atlas scvi	2	102	April 24, 2026
MrVI input and interpretation	28	2261	April 23, 2026
ResolVI Corrected Counts for Segmented Visium HD Data scvi	3	205	April 23, 2026
Correct way to run SOLO for doublet detection scvi , solo , doublets	2	130	April 23, 2026
Mapping 10X Xenium 5k data to scRNA-seq reference integration	3	218	April 23, 2026
PeakVI preprocessing for multi-timepoint scATAC-seq when peak coordinates differ slightly across samples peakvi	2	76	April 23, 2026
MRVI Jax Error "Invalid component distribution" integration	3	98	April 13, 2026
CPU memory usage in multi-GPU training	6	203	April 4, 2026
Unstable result scvi	2	391	March 27, 2026
Macbook M1 M2 mps acceleration with scVI developer	10	2352	March 3, 2026
Regarding resolvi reproducibility scripts and fov for xenium scvi	2	136	March 2, 2026
Is older advice for estimating optimal number of epochs for model training of scVI still recommended? scrna-seq , scvi	6	273	March 1, 2026
Ablating latent variables in LinearSCVI	5	250	February 24, 2026
Scvi-tools not allowing me to download cellxgene census data scvi , scvi-tools	2	93	January 28, 2026
Does Decipher require cell type annotation	6	167	January 28, 2026
Best practices for downstream analysis of Resolvi-corrected data	2	383	January 27, 2026
Resolvi differential test does not converge (?)	5	213	January 15, 2026
Data scaling for cytovi	2	124	January 15, 2026