Latest scvi-tools topics

Topic	Replies	Views	Activity
About the scvi-tools category For questions about using scvi-tools.	2	361	March 4, 2022
Hyperparameter optimization of SCVI model using the autotune package	3	48	March 28, 2023
scANVI relables known cells with known types incorrectly scanvi	12	698	March 28, 2023
About model.differential analysis diff-exp , scvi	0	19	March 26, 2023
Tuning/setting scvi.model.SCVI parameters scvi	9	361	March 25, 2023
DE analysis between two batch-specific clusters diff-exp , scvi	9	278	March 24, 2023
Batch correction in reconstructed gene space	4	45	March 24, 2023
Choosing a Dispersion Option in scvi Model Training	1	66	March 23, 2023
Make another probabilistic model in scvi-tools developer	2	91	March 22, 2023
GPU available but not using	7	231	March 17, 2023
Building machine learning model for lectin array	0	30	March 17, 2023
How to specify batch correction for 7 samples from two bacthes? scvi	2	72	March 15, 2023
Questions about running differential expression	9	170	March 14, 2023
Silence verbose logging during scVI training	2	63	March 12, 2023
DestVI gene imputation comparison between slides	0	46	March 11, 2023
totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data totalvi , multivi , modeling	3	265	March 9, 2023
Scvi importing problems	3	69	March 9, 2023
Don't extend labels for query data scanvi	1	44	March 6, 2023
MrVI input and interpretation	7	206	March 2, 2023
Mini-batching error after registering MuData .varm field with custom scvi-tools model scvi , developer	1	48	March 1, 2023
Model which can work on binary data	1	54	February 27, 2023
How to interpret vae.train() progress bar? scvi	1	61	February 23, 2023
Which values do you use to visualise gene expression?	3	191	February 21, 2023
Kernel dying when using scvi to train a model (m1 mac)	0	57	February 21, 2023
Scib_metrics run time	5	61	February 19, 2023
Minimum number of cells for scVI? scvi	2	71	February 15, 2023
Generate cell expression from latent space directly scvi	0	67	February 12, 2023
scVI access the model integration , scvi , developer	4	89	February 9, 2023
Scvi-toools based model does not log metrics on every step	3	66	February 5, 2023
Unstable result scvi	0	72	February 1, 2023