Latest scvi-tools topics

Topic	Replies	Views	Activity
About the scvi-tools category For questions about using scvi-tools.	2	1208	March 4, 2022
Mapping 10X Xenium 5k data to scRNA-seq reference integration	2	19	April 4, 2026
CPU memory usage in multi-GPU training	6	33	April 4, 2026
Correct way to run SOLO for doublet detection scvi , solo , doublets	1	18	March 28, 2026
Unstable result scvi	2	339	March 27, 2026
ResolVI Corrected Counts for Segmented Visium HD Data scvi	0	13	March 27, 2026
Macbook M1 M2 mps acceleration with scVI developer	10	2100	March 3, 2026
Regarding resolvi reproducibility scripts and fov for xenium scvi	2	42	March 2, 2026
Is older advice for estimating optimal number of epochs for model training of scVI still recommended? scrna-seq , scvi	6	71	March 1, 2026
Ablating latent variables in LinearSCVI	5	156	February 24, 2026
Scvi-tools not allowing me to download cellxgene census data scvi , scvi-tools	2	24	January 28, 2026
Does Decipher require cell type annotation	6	34	January 28, 2026
Best practices for downstream analysis of Resolvi-corrected data	2	156	January 27, 2026
Resolvi differential test does not converge (?)	5	73	January 15, 2026
Data scaling for cytovi	2	39	January 15, 2026
Imputation/Denoise output scvi	1	28	January 15, 2026
SCANVI Model Loading Issue: Partial Data and Workaround scanvi	1	30	January 11, 2026
Error in training resolvi model	5	89	January 5, 2026
Predict cell type with scANVI for spatial transcriptomics data (Xenium) integration , scanvi , scvi	7	324	December 28, 2025
Issue with scVI VAE reconstruction: High sensitivity to library size and poor rank preservation scvi	1	96	December 9, 2025
Issue with multiVI get_normalized_expression and get_normalized_accessibility multivi	5	117	December 7, 2025
Scvi 1.4.0. model.differential_expression outputs scvi	1	53	December 7, 2025
Corrected count for resolvi scvi	1	88	November 25, 2025
Question about complex experiment scrna-seq , integration , diff-exp , scvi , multivi	1	75	November 25, 2025
Loss_z1_weight and loss_z1_unweight in scANVI scanvi	3	516	November 25, 2025
Inquiry Regarding DRVI Model Compatibility with scANVI for Embedding Optimization? developer	1	50	November 25, 2025
Training not using the full GPU scvi	3	85	November 10, 2025
How to use totalVI denoised protein measurements totalvi	1	60	November 9, 2025
Question about get_normalized_expression computation scvi , totalvi	3	118	November 5, 2025
Batch key and categorical variables for get_normalized_expression()	2	135	November 4, 2025