|
Getting normalized expression
|
|
13
|
90
|
May 13, 2026
|
|
Interpretting differential gene expression dotplot
|
|
0
|
37
|
January 23, 2026
|
|
Question about complex experiment
|
|
1
|
86
|
November 25, 2025
|
|
Problems with Bayes factors and LFC changes using model.differential_expression()
|
|
8
|
321
|
July 9, 2025
|
|
Wrong log-fold change estimation?
|
|
3
|
111
|
July 9, 2025
|
|
In which direction is the LCF calculated when using the function differential_expression?
|
|
1
|
68
|
March 2, 2025
|
|
Scvi-tools: different DEGs when comparing same data
|
|
2
|
209
|
November 19, 2024
|
|
scVI integration set batch_key and poor Umap result
|
|
3
|
348
|
August 7, 2024
|
|
Question about differential expression and the batch_correction usage
|
|
0
|
216
|
June 7, 2024
|
|
Best way to rank genes for GSEA analysis
|
|
3
|
1069
|
June 5, 2024
|
|
Inquiry about Data Input and DE Analysis Details in scVI
|
|
4
|
409
|
May 3, 2024
|
|
Differential expression genes: test to use?
|
|
0
|
390
|
April 2, 2024
|
|
Mismatch between MAST DE results and dotplot
|
|
0
|
181
|
January 9, 2024
|
|
Different DEG results after loading .h5ad
|
|
0
|
353
|
August 19, 2023
|
|
How to use lvm-DE
|
|
3
|
505
|
June 2, 2023
|
|
DE analysis with model.SCVI: which lfc indicates gene up-/down-regulation?
|
|
2
|
1032
|
September 15, 2022
|
|
About model.differential analysis
|
|
0
|
323
|
March 26, 2023
|
|
DE analysis between two batch-specific clusters
|
|
9
|
891
|
March 24, 2023
|
|
3 sets of CITE-Seq data, how to concatenate or make single file for further analysis?
|
|
0
|
508
|
February 7, 2023
|
|
"Vanilla" vs "Change" Mode in Differential Expression
|
|
2
|
413
|
January 17, 2023
|
|
DE between conditions in a cluster
|
|
4
|
674
|
December 14, 2022
|
|
Marker gene selection: rank_marker_genes vs diffxpy
|
|
0
|
680
|
November 17, 2022
|
|
How experminetal is the experimental API?
|
|
0
|
290
|
October 7, 2022
|
|
Scvi-tools in DE benchmarking papers?
|
|
2
|
430
|
May 27, 2022
|
|
Differentially expressed genes between two Leiden clusters
|
|
8
|
1251
|
October 15, 2021
|
|
Differential expression between datasets
|
|
4
|
1203
|
May 20, 2021
|
|
Differential Gene Expression
|
|
2
|
937
|
March 20, 2021
|