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About the scanpy category
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0
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526
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March 4, 2022
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P-values for scanpy.tl.rank_genes_groups
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0
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5
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July 26, 2024
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Sc.pl.umap scales
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0
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4
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July 24, 2024
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Do I need to scale my adata before running sc.tl.score_genes?
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2
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81
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July 23, 2024
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Some default parameter annotations in API are confusing
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2
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29
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July 23, 2024
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Scanpy.tl.rank_genes_groups with wilcoxon returns same score for multiple genes
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0
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17
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July 15, 2024
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UMAP plot colors problem
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2
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122
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June 6, 2024
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How to find DE genes between different datasets?
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1
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117
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May 22, 2024
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Var_names_make_unique()
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1
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309
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May 9, 2024
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Subsetting anndata is causing error problems
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3
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561
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May 5, 2024
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Loosing anndata .var layer when using sc.concat?
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1
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450
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May 1, 2024
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Subsetting/Re-normalization issue
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1
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196
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April 30, 2024
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Computing sc.pp.neighbors without method?
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2
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387
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April 25, 2024
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How can I logarithmize the data for wilcoxon test?
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1
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130
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April 25, 2024
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Does processing the data always overwrite the raw counts?
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3
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1743
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April 22, 2024
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Question about diffusion map "gaussian" implementation
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3
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270
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April 22, 2024
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How to interpret Diffusion Maps?
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0
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218
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April 18, 2024
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How can I export list of genes and counts for each cluster from adata.raw?
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1
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256
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April 12, 2024
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Change the font family for scanpy.pl in linux
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1
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142
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April 11, 2024
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TCR and BCR genes and HVGs selection
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5
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171
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April 3, 2024
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Differential expression genes: test to use?
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0
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177
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April 2, 2024
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Leiden clustering gives me different results when I run it
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1
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206
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April 1, 2024
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Does Scanpy stores raw count as int or float?
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1
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177
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March 25, 2024
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Sc.pl.draw_graph
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1
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187
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March 19, 2024
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Normalized data found instead of raw counts
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2
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362
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March 18, 2024
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Sc.pl.draw_graph is strongly affected by the outliers
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0
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112
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March 18, 2024
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How to reuse cmap for other plots?
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3
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238
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March 9, 2024
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How to get dot values from `sc.pl.dotplot()`?
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1
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339
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March 1, 2024
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Remove genes from highly variable genes
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1
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356
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February 21, 2024
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Converting tab-delimited files to adata in a memory-efficient way
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3
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161
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February 21, 2024
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