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About the scanpy category
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0
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549
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March 4, 2022
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Difference between tl.rank_genes_groups and pl.rank_genes_groups_heatmap
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0
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10
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November 20, 2024
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Radial shape of cluster on UMAP, why?
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0
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17
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November 7, 2024
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Scanpy.pl.rank_genes_groups_dotplot doesn't plot gene symbols in adata.var_names
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0
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29
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September 30, 2024
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Sc.pp.regress_out() with large datasets
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0
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39
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September 19, 2024
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Split dotplot by condition
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0
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23
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September 12, 2024
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Trouble Making a Z-Score Heatmap
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2
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937
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September 11, 2024
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Loosing anndata .var layer when using sc.concat?
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3
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747
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September 9, 2024
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Changing color/size of textfont with sc.pl.umap
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2
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107
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September 4, 2024
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Understanding the behaviour of sc.pp.highly_variable_genes with a batch_key and different values of n_top_genes
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1
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66
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August 15, 2024
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Sc.pl.umap scales
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1
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36
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July 30, 2024
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P-values for scanpy.tl.rank_genes_groups
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1
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64
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July 30, 2024
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Stannotation with scanpy and seaborn
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0
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34
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July 30, 2024
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Do I need to scale my adata before running sc.tl.score_genes?
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2
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110
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July 23, 2024
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Some default parameter annotations in API are confusing
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2
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41
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July 23, 2024
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Scanpy.tl.rank_genes_groups with wilcoxon returns same score for multiple genes
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0
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90
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July 15, 2024
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UMAP plot colors problem
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2
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386
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June 6, 2024
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How to find DE genes between different datasets?
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1
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170
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May 22, 2024
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Var_names_make_unique()
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1
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638
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May 9, 2024
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Subsetting anndata is causing error problems
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3
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629
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May 5, 2024
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Subsetting/Re-normalization issue
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1
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223
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April 30, 2024
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Computing sc.pp.neighbors without method?
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2
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455
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April 25, 2024
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How can I logarithmize the data for wilcoxon test?
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1
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213
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April 25, 2024
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Does processing the data always overwrite the raw counts?
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3
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1963
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April 22, 2024
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Question about diffusion map "gaussian" implementation
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3
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279
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April 22, 2024
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How to interpret Diffusion Maps?
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0
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290
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April 18, 2024
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How can I export list of genes and counts for each cluster from adata.raw?
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1
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343
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April 12, 2024
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Change the font family for scanpy.pl in linux
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1
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178
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April 11, 2024
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TCR and BCR genes and HVGs selection
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5
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182
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April 3, 2024
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Differential expression genes: test to use?
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0
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227
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April 2, 2024
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