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About the scanpy category
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0
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567
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March 4, 2022
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Unexplained change in UMAP
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3
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43
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May 27, 2025
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Sc.pp.highly_variable_genes with batch_key causes segmentation fault
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2
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203
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May 26, 2025
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Best Practices for Multi-Panel Figures
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0
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33
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April 11, 2025
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Stacked violin API related question
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2
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354
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April 1, 2025
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Any MLX (MPS) framework accelerate solution for scanpy？
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1
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49
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March 31, 2025
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Split dotplot by condition
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2
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110
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March 3, 2025
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Rank_genes_groups pts and DE
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0
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70
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February 27, 2025
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Reg negative and positive TF activity values
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0
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17
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February 24, 2025
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Help with harmony and scanpy
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3
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284
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February 14, 2025
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Weird output combat integration two datasets
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2
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34
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February 6, 2025
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How to deal with negative logfoldchange in dotplot
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0
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28
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February 6, 2025
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Replicating data analysis using published pipeline
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0
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32
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December 10, 2024
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Psutil error when running sc.neighbors() in tutorial notebook
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0
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24
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December 5, 2024
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Difference between differentialy expressed genes and violin plot
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0
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38
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December 3, 2024
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10X data import, "No such file or directory: features.tsv.gz"
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0
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63
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November 29, 2024
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Use a dictionnary with heatmaps
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0
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10
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November 25, 2024
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Difference between tl.rank_genes_groups and pl.rank_genes_groups_heatmap
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0
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97
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November 20, 2024
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Radial shape of cluster on UMAP, why?
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0
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103
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November 7, 2024
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Scanpy.pl.rank_genes_groups_dotplot doesn't plot gene symbols in adata.var_names
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0
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108
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September 30, 2024
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Sc.pp.regress_out() with large datasets
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0
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112
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September 19, 2024
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Trouble Making a Z-Score Heatmap
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2
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1104
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September 11, 2024
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Loosing anndata .var layer when using sc.concat?
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3
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1107
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September 9, 2024
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Changing color/size of textfont with sc.pl.umap
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2
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315
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September 4, 2024
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Understanding the behaviour of sc.pp.highly_variable_genes with a batch_key and different values of n_top_genes
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1
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137
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August 15, 2024
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Sc.pl.umap scales
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1
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94
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July 30, 2024
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P-values for scanpy.tl.rank_genes_groups
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1
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138
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July 30, 2024
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Stannotation with scanpy and seaborn
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0
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42
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July 30, 2024
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Do I need to scale my adata before running sc.tl.score_genes?
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2
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171
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July 23, 2024
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Some default parameter annotations in API are confusing
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2
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52
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July 23, 2024
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