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ModuleNotFoundErrror: no module named "importlib.metadata"
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4
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1492
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February 15, 2024
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Error with cyclone ['DataFrame' object has no attribute 'iteritems' ]
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0
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199
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February 12, 2024
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Plots shifted when using scanpy in R markdown
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0
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111
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February 1, 2024
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Trying to read custom genome using sc.read_10x_h5
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0
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245
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January 26, 2024
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Heatmap cannot be assigned as a subplot
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1
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272
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January 16, 2024
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Umap shapes different for the same dataset
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1
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209
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January 15, 2024
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Mismatch between MAST DE results and dotplot
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0
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140
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January 9, 2024
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Pl.dotplot : legend(mean expression in group) number is so large
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1
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302
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January 9, 2024
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Option to plot separate umaps for concatenated datasets
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4
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478
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December 27, 2023
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Weird oval umap cluster
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0
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183
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December 25, 2023
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Sc.pp.highly_variable_genes with batch_key causes segmentation fault
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0
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146
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December 24, 2023
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Differential gene expression - normalize gene values?
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0
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173
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December 6, 2023
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Error when saving adata with adata.write_h5ad(): "Above error raised while writing key 'names' of to /"
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2
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1434
|
December 3, 2023
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UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored
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8
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6742
|
December 1, 2023
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Methods of calculating graphs
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0
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197
|
November 9, 2023
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Scanpy equivalent of Seurat's FindConservedMarkers
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0
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265
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November 8, 2023
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Correlation matrix values
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0
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269
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November 8, 2023
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Reading matrix.mtx with "real" number format
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0
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279
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October 29, 2023
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Contour Plot based on gene expression or score
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0
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353
|
October 26, 2023
|
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How to show the cells on my umap projection based on barcodes
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2
|
430
|
October 12, 2023
|
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Run scanpy.pp.neighbors and UMAP on a different layer other than X?
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2
|
610
|
October 11, 2023
|
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Specify prefix with regular expression in scanpy.read_10x_mtx()
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0
|
279
|
October 2, 2023
|
|
How to ScanPy cluster already CPM normalized/log transformed data?
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6
|
1084
|
October 1, 2023
|
|
Expression_cutoff optiion from scanpy.pl.dotplot function
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0
|
195
|
September 28, 2023
|
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Gene shows up in dotplot, but it's not present in var_names
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1
|
387
|
September 16, 2023
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Normalization on rpkm data
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0
|
222
|
September 11, 2023
|
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Error when draw UMAP: object has no attribute 'get_cmap'
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4
|
2768
|
September 5, 2023
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Set dtype to np.float32 and memory conservation
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0
|
223
|
September 1, 2023
|
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Comparing number of differentially expressed genes (DEGs)
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0
|
318
|
August 31, 2023
|
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Why scanpy computes HVGs based on the data after log1p?
|
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0
|
281
|
August 28, 2023
|