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Difference between differentialy expressed genes and violin plot
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0
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82
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December 3, 2024
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10X data import, "No such file or directory: features.tsv.gz"
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0
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125
|
November 29, 2024
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Use a dictionnary with heatmaps
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0
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58
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November 25, 2024
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Difference between tl.rank_genes_groups and pl.rank_genes_groups_heatmap
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0
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278
|
November 20, 2024
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Radial shape of cluster on UMAP, why?
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0
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186
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November 7, 2024
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Scanpy.pl.rank_genes_groups_dotplot doesn't plot gene symbols in adata.var_names
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0
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221
|
September 30, 2024
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Sc.pp.regress_out() with large datasets
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0
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221
|
September 19, 2024
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Trouble Making a Z-Score Heatmap
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2
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1305
|
September 11, 2024
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Loosing anndata .var layer when using sc.concat?
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3
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1488
|
September 9, 2024
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Changing color/size of textfont with sc.pl.umap
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2
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623
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September 4, 2024
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Understanding the behaviour of sc.pp.highly_variable_genes with a batch_key and different values of n_top_genes
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1
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430
|
August 15, 2024
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Sc.pl.umap scales
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1
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165
|
July 30, 2024
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P-values for scanpy.tl.rank_genes_groups
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1
|
185
|
July 30, 2024
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Stannotation with scanpy and seaborn
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0
|
59
|
July 30, 2024
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Do I need to scale my adata before running sc.tl.score_genes?
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2
|
271
|
July 23, 2024
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Some default parameter annotations in API are confusing
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2
|
57
|
July 23, 2024
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Scanpy.tl.rank_genes_groups with wilcoxon returns same score for multiple genes
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0
|
343
|
July 15, 2024
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UMAP plot colors problem
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2
|
1030
|
June 6, 2024
|
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How to find DE genes between different datasets?
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1
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443
|
May 22, 2024
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Var_names_make_unique()
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1
|
1457
|
May 9, 2024
|
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Subsetting anndata is causing error problems
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3
|
798
|
May 5, 2024
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Subsetting/Re-normalization issue
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1
|
303
|
April 30, 2024
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Computing sc.pp.neighbors without method?
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2
|
730
|
April 25, 2024
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How can I logarithmize the data for wilcoxon test?
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1
|
493
|
April 25, 2024
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Does processing the data always overwrite the raw counts?
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3
|
2420
|
April 22, 2024
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Question about diffusion map "gaussian" implementation
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3
|
337
|
April 22, 2024
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How to interpret Diffusion Maps?
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0
|
504
|
April 18, 2024
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How can I export list of genes and counts for each cluster from adata.raw?
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1
|
614
|
April 12, 2024
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Change the font family for scanpy.pl in linux
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1
|
329
|
April 11, 2024
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TCR and BCR genes and HVGs selection
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|
5
|
304
|
April 3, 2024
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