Topics tagged developer

Topic	Replies	Views	Activity
Expression_cutoff optiion from scanpy.pl.dotplot function scanpy developer	0	71	September 28, 2023
How to best integrate Genomic Variant Information muon integration , developer	1	117	August 16, 2023
UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored scanpy scvi , developer	7	4377	July 7, 2023
Debugging Issue for CITE-seq analysis with totalVI juytper notebook tutorial scvi-tools scvi , totalvi , developer	6	147	June 21, 2023
COMPASS Installation tutorial - CPLEX Installation General integration , developer	0	149	June 19, 2023
AnnLoader for mudata? mudata developer	1	255	April 18, 2023
Question about Github Issue scanpy developer	2	566	March 22, 2023
Make another probabilistic model in scvi-tools scvi-tools developer	2	233	March 22, 2023
Mini-batching error after registering MuData .varm field with custom scvi-tools model scvi-tools scvi , developer	1	179	March 1, 2023
scVI access the model scvi-tools integration , scvi , developer	4	257	February 9, 2023
How to create a layer over a subset of .obs or .vars? anndata developer	1	313	January 20, 2023
Adding "equipment" to AnnData objects for neat addition of functionality Ecosystem developer	3	293	November 1, 2022
How to dynamically mask categorical_covariate_keys during training? scvi-tools scvi , multivi , developer	3	217	October 19, 2022
Progress not reporting loss from custom training plan scvi-tools scvi , developer	3	340	October 5, 2022
Difference between `TrainingPlan.log()` vs `TrainingPlan.compute_and_log_metrics()`? scvi-tools scvi , developer	1	191	October 5, 2022
Calls to decoder.forward() in VAE.generative() wrt the current DecoderSCVI API? scvi-tools scvi , developer	0	195	September 15, 2022
`tests/models/test_pyro.py::test_pyro_bayesian_save_load` fails scvi-tools scvi , developer	2	362	August 26, 2022
Help understanding inheritance for scvi.models scvi-tools scvi , developer	1	240	August 22, 2022
Consistent results when using scvi.model.SCVI scvi-tools scvi , developer	3	440	May 11, 2022
Device _make_data_loader for prediction scvi-tools developer	2	264	December 29, 2021
Attribution and license when using the scvi-tools-skeleton scvi-tools developer	4	358	November 6, 2021
Docker image for scvitools scvi-tools developer	1	541	October 15, 2021
Validation of Developer Guide codes for scVI implementation scvi-tools developer	2	304	August 30, 2021
Understanding GIMVI trainingplan scvi-tools developer , gimvi	4	471	July 29, 2021