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About the anndata category
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0
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481
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March 4, 2022
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Seeking guidance and reviewers for AnnData HTML representation PR (#2236)
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2
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27
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December 1, 2025
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.raw. car_names reassignation
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2
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31
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November 20, 2025
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Convert Scanpy (h5ad) to Seurat (rds)
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10
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18351
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November 6, 2025
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Changing the order of the anndata objects in anndata.concat changes the leiden clustering
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6
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164
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October 9, 2025
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Memory Usage in multiple New Formats
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2
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149
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September 2, 2025
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How can I operate on view of Anndata object when the Object itself is large to load to memory?
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1
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142
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September 2, 2025
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Lazy Loading Anndata backed in Zarr Arrays from Disk
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5
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365
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May 28, 2025
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Efficient pseudobulking
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4
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331
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May 28, 2025
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Convert anndata to seurat (spatial)
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1
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212
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May 9, 2025
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How to transfer annotation from cell subset to original object?
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1
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115
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April 10, 2025
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Lazy loading of Zarr from S3
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3
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209
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January 30, 2025
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Error reading HDF5 file in MuData/AnnData
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2
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110
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October 6, 2024
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How can I process anndata using multiprocessing?
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2
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207
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September 27, 2024
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CNV scores in infercnvpy
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0
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130
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September 6, 2024
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Anndata.concat([a,b], join="inner") does not behave as a.concat(b)
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1
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210
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September 4, 2024
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Filtering out a subset of genes in adata
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3
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1105
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July 31, 2024
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How can I load an anndata object when 'raw' was saved as a dictionary
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1
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199
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July 23, 2024
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How to subset anndata variables, but still store the removed variables elsewhere for downstream analysis?
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1
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213
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July 23, 2024
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Differences between .X, .raw.X, and .raw in anndata object
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6
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7478
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May 10, 2024
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Subset on adata.uns["X"].var - help please!
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1
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390
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May 8, 2024
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Subsetting anndata using genelist
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4
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4559
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May 5, 2024
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Help with concat
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2
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1111
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May 1, 2024
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Managing anndata with multiple features from each gene
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4
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142
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April 17, 2024
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Is anndata limited to 2d data?
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3
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425
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April 5, 2024
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Issues setting up anndata for SCVI
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2
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528
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April 2, 2024
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Merging identical genes from 10x fixed scRNA
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3
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389
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March 6, 2024
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How to reorder adata according to sorted indices?
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4
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1085
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February 27, 2024
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Cannot modify AnnData object
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2
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1077
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February 16, 2024
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Bus error when writing concatenated adata
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1
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185
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January 26, 2024
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