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About the anndata category
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0
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445
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March 4, 2022
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Convert anndata to seurat (spatial)
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1
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10
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May 9, 2025
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Memory Usage in multiple New Formats
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0
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21
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April 13, 2025
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Lazy Loading Anndata backed in Zarr Arrays from Disk
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4
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52
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April 11, 2025
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How to transfer annotation from cell subset to original object?
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1
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31
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April 10, 2025
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Efficient pseudobulking
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2
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52
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February 27, 2025
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Lazy loading of Zarr from S3
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3
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49
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January 30, 2025
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Error reading HDF5 file in MuData/AnnData
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2
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56
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October 6, 2024
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Convert Scanpy (h5ad) to Seurat (rds)
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9
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14796
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September 27, 2024
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How can I process anndata using multiprocessing?
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2
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84
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September 27, 2024
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CNV scores in infercnvpy
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0
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55
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September 6, 2024
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Anndata.concat([a,b], join="inner") does not behave as a.concat(b)
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1
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140
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September 4, 2024
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Filtering out a subset of genes in adata
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3
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552
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July 31, 2024
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How can I load an anndata object when 'raw' was saved as a dictionary
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1
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87
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July 23, 2024
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How to subset anndata variables, but still store the removed variables elsewhere for downstream analysis?
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1
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110
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July 23, 2024
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Differences between .X, .raw.X, and .raw in anndata object
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6
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6292
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May 10, 2024
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Subset on adata.uns["X"].var - help please!
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1
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263
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May 8, 2024
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Subsetting anndata using genelist
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4
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3814
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May 5, 2024
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Help with concat
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2
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967
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May 1, 2024
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Managing anndata with multiple features from each gene
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4
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109
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April 17, 2024
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Is anndata limited to 2d data?
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3
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378
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April 5, 2024
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Issues setting up anndata for SCVI
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2
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403
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April 2, 2024
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Merging identical genes from 10x fixed scRNA
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3
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267
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March 6, 2024
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How to reorder adata according to sorted indices?
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4
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790
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February 27, 2024
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Cannot modify AnnData object
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2
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857
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February 16, 2024
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Bus error when writing concatenated adata
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1
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166
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January 26, 2024
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Var counts 0 after gene filtering
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1
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191
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January 25, 2024
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Converting view of a backed anndata object into non-view/non-backed
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2
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419
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January 16, 2024
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Counts in layers is zero after ad.concat
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2
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186
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January 15, 2024
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Sorting annData object by observations or variables?
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1
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1164
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January 10, 2024
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