About the Help category
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0
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169
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March 4, 2022
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"ValueError: cannot specify integer `bins` when input data contains infinity" in multi sample data
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4
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61
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March 30, 2023
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How to check average gene expression for each of 2 conditions within a cluster in scanpy?
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0
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11
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March 30, 2023
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Plotting repertoire overlap as a heatmap with scirpy
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2
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16
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March 29, 2023
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Hyperparameter optimization of SCVI model using the autotune package
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3
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48
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March 28, 2023
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Squidpy comparative statistics
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2
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61
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March 28, 2023
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Centrality Score: Understanding average clustering
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1
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82
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March 28, 2023
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scANVI relables known cells with known types incorrectly
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12
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698
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March 28, 2023
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Problems subsetting
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0
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19
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March 27, 2023
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About model.differential analysis
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0
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19
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March 26, 2023
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Tuning/setting scvi.model.SCVI parameters
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9
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361
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March 25, 2023
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DE analysis between two batch-specific clusters
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9
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278
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March 24, 2023
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Batch correction in reconstructed gene space
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4
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45
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March 24, 2023
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Choosing a Dispersion Option in scvi Model Training
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1
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66
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March 23, 2023
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Subclustering of one single cluster in my UMAP Plot
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0
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24
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March 23, 2023
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Is anndata limited to 2d data?
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1
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35
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March 22, 2023
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Question about Github Issue
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2
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65
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March 22, 2023
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UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored
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4
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312
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March 22, 2023
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Make another probabilistic model in scvi-tools
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2
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91
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March 22, 2023
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How to load the AKOYA(CODEX) processor pipeline outputs a csv files for Squidpy?
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2
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105
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March 22, 2023
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How to read in the Spatial object directly from gene count matrix (.mtx) file and related images (without HDF5 file)?
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0
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18
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March 22, 2023
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How to assign the specific colors to cell types on umaps across different dataset?
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2
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29
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March 20, 2023
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GPU available but not using
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7
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231
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March 17, 2023
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Building machine learning model for lectin array
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0
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30
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March 17, 2023
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How to make a UMAP for single cell data and color cells by average expression of a list of genes in scanpy?
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1
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123
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March 16, 2023
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Subsetting anndata is causing error problems
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1
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51
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March 16, 2023
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Scanpy HVG batch_key
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1
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69
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March 16, 2023
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Read_10x_mtx error UnicodeDecodeError:
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1
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65
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March 16, 2023
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Subsetting populations
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1
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52
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March 16, 2023
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Identifying pseudotime-associated genes with GAM
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1
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84
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March 16, 2023
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