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About the Help category
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0
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205
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March 4, 2022
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Dealing with multiple samples
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0
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22
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May 26, 2023
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Current status of dask support (and on disk sparse arrays)
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1
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32
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May 25, 2023
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AttributeError: module 'jax' has no attribute 'Device'
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2
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36
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May 25, 2023
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Add new gene/var to scanpy object
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0
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12
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May 25, 2023
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HVG selection 'flavors'
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1
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59
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May 25, 2023
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sq.pl.spatial_segment( TypeError: 'collection'
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1
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12
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May 24, 2023
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Spatial Segment TypeError
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1
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72
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May 24, 2023
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Help concatenating var for cite seq
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2
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43
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May 24, 2023
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Read_10x_h5 Error
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1
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61
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May 23, 2023
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CITEsq loading in RNA and ADT data
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1
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54
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May 19, 2023
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Reading in data with scanpy.read_10x_mtx gives back KeyError:1 when features.tsv contains only one column (gene symbols) and ValueError when adding 2 columns (gene ids and feature types)(
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0
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29
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May 17, 2023
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Interpretation of fold-changes in differential expression analysis
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2
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60
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May 17, 2023
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DE analysis with model.SCVI: which lfc indicates gene up-/down-regulation?
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2
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355
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September 15, 2022
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Show cluster numbers on scanpy UMAP plot like in Featureplot in Seurat
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4
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464
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May 15, 2023
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Is it acceptable practice to correct cell labels based on UMAP coordinates?
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0
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36
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May 12, 2023
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Extract cell name from scvi dataset
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2
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29
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May 11, 2023
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Using scVI-integrated data for scVelo and CellRank analysis - what embeddings to supply for velocity?
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3
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78
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May 11, 2023
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FCLayers bias' gradient set to 0
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2
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37
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May 10, 2023
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Topic modelling or factorization on integrated scRNA-seq data?
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0
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55
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May 10, 2023
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Understanding the GPU related warning while setting up SCVI
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1
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121
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May 10, 2023
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Totalvi failing to write an h5mu objecy
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7
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25
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May 10, 2023
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Gpu advices for new computer
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4
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30
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May 9, 2023
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Metadata file is empty after reading in with sp.read.vizgen
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1
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33
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May 9, 2023
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I want to draw dendrogram on both x and y axes in scanpy's sc.pl .dotplot
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0
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45
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May 9, 2023
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Violin plot - subset vs. all cells
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0
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31
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May 8, 2023
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Failed to import scanpy on jupyter notebook
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0
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50
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May 8, 2023
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scArches with multiple covariates
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3
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81
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May 5, 2023
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Working with Multiple samples with PEAKVI
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1
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57
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May 5, 2023
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Batch effect correction using combat
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2
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82
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May 4, 2023
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