|
About the Help category
|
|
0
|
593
|
March 4, 2022
|
|
Filter_by_expr parameters Decoupler
|
|
4
|
17
|
April 8, 2026
|
|
Impact of tmin parameter (decoupler.mt.ulm)
|
|
1
|
8
|
April 6, 2026
|
|
Multi-threading support in decoupler
|
|
1
|
38
|
April 6, 2026
|
|
Mapping 10X Xenium 5k data to scRNA-seq reference
|
|
2
|
21
|
April 4, 2026
|
|
CPU memory usage in multi-GPU training
|
|
6
|
33
|
April 4, 2026
|
|
Correct way to run SOLO for doublet detection
|
|
1
|
18
|
March 28, 2026
|
|
How to use GPU partitions (MIGs)?
|
|
1
|
13
|
March 28, 2026
|
|
Unstable result
|
|
2
|
339
|
March 27, 2026
|
|
ResolVI Corrected Counts for Segmented Visium HD Data
|
|
0
|
14
|
March 27, 2026
|
|
Sc.pl.rank_genes_groups_heatmap - saving figure to file
|
|
1
|
38
|
March 13, 2026
|
|
Plotting the tangram imputed spatial data with spatialdata_plot
|
|
3
|
26
|
March 11, 2026
|
|
Macbook M1 M2 mps acceleration with scVI
|
|
10
|
2100
|
March 3, 2026
|
|
Regarding resolvi reproducibility scripts and fov for xenium
|
|
2
|
42
|
March 2, 2026
|
|
Is older advice for estimating optimal number of epochs for model training of scVI still recommended?
|
|
6
|
71
|
March 1, 2026
|
|
Ablating latent variables in LinearSCVI
|
|
5
|
156
|
February 24, 2026
|
|
Obs.perturbation and obs.gene in Replogle dataset
|
|
2
|
11
|
February 19, 2026
|
|
Can scCODA in pertpy be applied to compositional analysis of annotated spatial transcriptomics spots?
|
|
1
|
18
|
February 10, 2026
|
|
Scvi-tools not allowing me to download cellxgene census data
|
|
2
|
24
|
January 28, 2026
|
|
Does Decipher require cell type annotation
|
|
6
|
34
|
January 28, 2026
|
|
Best practices for downstream analysis of Resolvi-corrected data
|
|
2
|
156
|
January 27, 2026
|
|
Interpretting differential gene expression dotplot
|
|
0
|
25
|
January 23, 2026
|
|
When to use the batch_key in highly_variable_genes()
|
|
0
|
25
|
January 21, 2026
|
|
Invitation to Maintain Your Package in Claude Scientific Skills
|
|
2
|
22
|
January 28, 2026
|
|
Resolvi differential test does not converge (?)
|
|
5
|
73
|
January 15, 2026
|
|
Data scaling for cytovi
|
|
2
|
39
|
January 15, 2026
|
|
Imputation/Denoise output
|
|
1
|
28
|
January 15, 2026
|
|
SCANVI Model Loading Issue: Partial Data and Workaround
|
|
1
|
30
|
January 11, 2026
|
|
Error in training resolvi model
|
|
5
|
89
|
January 5, 2026
|
|
Predict cell type with scANVI for spatial transcriptomics data (Xenium)
|
|
7
|
325
|
December 28, 2025
|