About the Help category
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0
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302
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March 4, 2022
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Problem with airr data loading
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9
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66
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September 28, 2023
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Plotting only transcripts
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3
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15
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September 27, 2023
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Pl.ligrec error in latest version of squidpy
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4
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257
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September 27, 2023
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Re-integration after subseting cluster
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2
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48
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September 26, 2023
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Increase scVI integration speed
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4
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44
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September 26, 2023
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Deconvolute spatial (Visium) using a bulk RNA-seq dataset
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1
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31
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September 26, 2023
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Sequential scArches
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0
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25
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September 24, 2023
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Gene shows up in dotplot, but it's not present in var_names
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1
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37
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September 16, 2023
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scVI integration using two batch keys
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4
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67
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September 15, 2023
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Save layer back to spatialdata from napari
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5
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33
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September 15, 2023
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How to save intermediate checkpoints?
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1
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102
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September 14, 2023
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How to install solo-sc or use hashsolo from scvi?
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4
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117
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September 11, 2023
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Get var_names used for training SCVI model
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0
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36
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September 11, 2023
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Normalization on rpkm data
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0
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34
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September 11, 2023
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Is it possible to include leading edge genes in decoupler.run_gsea output?
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3
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162
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September 8, 2023
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How to properly save and load a TotalVI trained model that's based on mudata?
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1
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60
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September 7, 2023
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scVI reproducibility seed issue
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2
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92
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September 7, 2023
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Error with import scvi
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2
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60
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September 7, 2023
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The way to let pertpy use GPU
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2
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120
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September 7, 2023
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Error when saving adata with adata.write_h5ad(): "Above error raised while writing key 'names' of to /"
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1
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102
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September 5, 2023
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Error when draw UMAP: object has no attribute 'get_cmap'
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4
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273
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September 5, 2023
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Set dtype to np.float32 and memory conservation
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0
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47
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September 1, 2023
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Comparing number of differentially expressed genes (DEGs)
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0
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76
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August 31, 2023
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Problems importing scvi [Windows]
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22
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2577
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August 29, 2023
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TypeError when trying to set up scvi.model.TOTALVI()
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2
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71
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August 29, 2023
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Loading an scVI model from a pytorch lightning checkpoint
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3
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135
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August 29, 2023
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Increase number of CPU cores for vae.train() in scvi?
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3
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87
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August 28, 2023
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Nonsense UMAP when including categorical covariates in a MULTIVI model
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1
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80
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August 28, 2023
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Why scanpy computes HVGs based on the data after log1p?
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0
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53
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August 28, 2023
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