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Issue with multiVI get_normalized_expression and get_normalized_accessibility
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5
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31
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December 7, 2025
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Question about complex experiment
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1
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35
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November 25, 2025
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MultiVI questions on Integrating Multiple Multiome Datasets
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1
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65
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September 25, 2025
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multiVI speed and cpu consumption
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2
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61
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August 30, 2025
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Does MultiVI support using tile matrix directly instead of peak calling for ATAC input?
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2
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71
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July 9, 2025
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Protocol for model optimization (currently focused on MultiVI)
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3
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600
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May 14, 2025
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[suggestion] what would be the appropriate pipeline to perform joint embedding of GEX and ATAC?
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1
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107
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October 17, 2024
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Scvi.data.organize_multiome_anndatas with two big anndata objects
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1
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196
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May 3, 2024
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Integration of Multiple Multiome Datasets
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5
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791
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March 6, 2024
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How to compute the integration metrics
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1
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207
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February 16, 2024
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MultiVI size factor for multiple modalities
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0
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236
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November 24, 2023
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Nonsense UMAP when including categorical covariates in a MULTIVI model
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1
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318
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August 28, 2023
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"ValueError: cannot specify integer `bins` when input data contains infinity" in multi sample data
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6
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4842
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June 27, 2023
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Dataset integration and analysis
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3
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936
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May 3, 2023
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totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data
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3
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848
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March 9, 2023
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3 sets of CITE-Seq data, how to concatenate or make single file for further analysis?
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0
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496
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February 7, 2023
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Anndata.concatenate() with two 10x multiome datasets?
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2
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688
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December 29, 2022
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How to dynamically mask categorical_covariate_keys during training?
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3
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392
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October 19, 2022
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Clarification on unpaired data smoothing during MultiVI `training_step()`?
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0
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293
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October 7, 2022
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multiVI and totalVI modal integration question
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0
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510
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September 15, 2022
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Advice regarding complex multimodal integration/analysis strategy
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0
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415
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July 28, 2022
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How to impute the modality (like ATAC) when I only have the other modality (RNA) using a pre-trained MultiVI?
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5
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378
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July 1, 2022
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Labels_key not available for scvi.model.MULTIVI.setup_anndata()
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3
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474
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March 1, 2022
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Reference mapping with MultiVI
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0
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410
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January 25, 2022
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Integrate multiple samples for paired multi-omics data
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1
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627
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February 15, 2022
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MULTIVI training fails before first epoch
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1
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533
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December 16, 2021
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MultiVi with multiple GPUs and CPUs
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2
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1124
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December 2, 2021
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