|
Issue with multiVI get_normalized_expression and get_normalized_accessibility
|
|
5
|
63
|
December 7, 2025
|
|
Question about complex experiment
|
|
1
|
62
|
November 25, 2025
|
|
MultiVI questions on Integrating Multiple Multiome Datasets
|
|
1
|
106
|
September 25, 2025
|
|
multiVI speed and cpu consumption
|
|
2
|
70
|
August 30, 2025
|
|
Does MultiVI support using tile matrix directly instead of peak calling for ATAC input?
|
|
2
|
78
|
July 9, 2025
|
|
Protocol for model optimization (currently focused on MultiVI)
|
|
3
|
640
|
May 14, 2025
|
|
[suggestion] what would be the appropriate pipeline to perform joint embedding of GEX and ATAC?
|
|
1
|
116
|
October 17, 2024
|
|
Scvi.data.organize_multiome_anndatas with two big anndata objects
|
|
1
|
205
|
May 3, 2024
|
|
Integration of Multiple Multiome Datasets
|
|
5
|
817
|
March 6, 2024
|
|
How to compute the integration metrics
|
|
1
|
231
|
February 16, 2024
|
|
MultiVI size factor for multiple modalities
|
|
0
|
251
|
November 24, 2023
|
|
Nonsense UMAP when including categorical covariates in a MULTIVI model
|
|
1
|
329
|
August 28, 2023
|
|
"ValueError: cannot specify integer `bins` when input data contains infinity" in multi sample data
|
|
6
|
4897
|
June 27, 2023
|
|
Dataset integration and analysis
|
|
3
|
949
|
May 3, 2023
|
|
totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data
|
|
3
|
859
|
March 9, 2023
|
|
3 sets of CITE-Seq data, how to concatenate or make single file for further analysis?
|
|
0
|
503
|
February 7, 2023
|
|
Anndata.concatenate() with two 10x multiome datasets?
|
|
2
|
699
|
December 29, 2022
|
|
How to dynamically mask categorical_covariate_keys during training?
|
|
3
|
400
|
October 19, 2022
|
|
Clarification on unpaired data smoothing during MultiVI `training_step()`?
|
|
0
|
296
|
October 7, 2022
|
|
multiVI and totalVI modal integration question
|
|
0
|
522
|
September 15, 2022
|
|
Advice regarding complex multimodal integration/analysis strategy
|
|
0
|
450
|
July 28, 2022
|
|
How to impute the modality (like ATAC) when I only have the other modality (RNA) using a pre-trained MultiVI?
|
|
5
|
400
|
July 1, 2022
|
|
Labels_key not available for scvi.model.MULTIVI.setup_anndata()
|
|
3
|
483
|
March 1, 2022
|
|
Reference mapping with MultiVI
|
|
0
|
423
|
January 25, 2022
|
|
Integrate multiple samples for paired multi-omics data
|
|
1
|
641
|
February 15, 2022
|
|
MULTIVI training fails before first epoch
|
|
1
|
539
|
December 16, 2021
|
|
MultiVi with multiple GPUs and CPUs
|
|
2
|
1134
|
December 2, 2021
|