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Unstable result
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0
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8
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February 1, 2023
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Transform_batch parameter of scVI's get_normalized_expression
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2
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50
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January 28, 2023
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Ambient RNA Filtering with scAR prior to scVI
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1
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50
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January 23, 2023
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Re-integrate after removing low-quality cells?
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2
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49
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January 23, 2023
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Best way to rank genes for GSEA analysis
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1
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39
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January 23, 2023
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Multiple training sets with scVI?
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1
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40
|
January 20, 2023
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Dimensionality reduction of 10x visium spatial datasets
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1
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48
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January 15, 2023
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inferCNVpy after running scVI with batch as key
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3
|
90
|
January 11, 2023
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Error when using 'get_normalized_expression'
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0
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33
|
January 5, 2023
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Is it possible to do second round integration via X_normalized_scVI normalized counts?
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0
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33
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January 5, 2023
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Selection of HVG in scVI
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3
|
131
|
December 20, 2022
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Help importing scvi in conda environment on new Mac M1
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1
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45
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December 20, 2022
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DE between conditions in a cluster
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4
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68
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December 14, 2022
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Problems importing scvi [Windows]
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12
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343
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December 13, 2022
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Label transfer with SCVI-SCANVI pipeline changes (predicts wrong) labels in ref data
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6
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92
|
December 12, 2022
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Getting the parameters and their names of scVI
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1
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54
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December 10, 2022
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Smartseq data prep for SCVI
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3
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78
|
December 10, 2022
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Scvi model kills kernel when .train() is called on Macbook Pro with Apple M1 Pro Chip
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3
|
68
|
December 1, 2022
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Integration with scVI
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2
|
89
|
November 30, 2022
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Unable to install windows pre-requisites (scvi-env)
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1
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172
|
November 28, 2022
|
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Loading a converted model fails to recognize GPU
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1
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44
|
November 21, 2022
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Spatial datasets integration
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4
|
149
|
November 18, 2022
|
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scANVI fails and returns NaNs after few epochs
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2
|
92
|
November 11, 2022
|
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AttributeError: ~ object has no attribute '_adata_manager'
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3
|
44
|
November 8, 2022
|
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How to concatenate anndata properly?
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2
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296
|
November 3, 2022
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Integration of timelapse scRNA data
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3
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90
|
October 25, 2022
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Scvi labels_key
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1
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81
|
October 25, 2022
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Question about get_latent_representation function of scvi for scRNAseq data
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7
|
94
|
October 21, 2022
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How to dynamically mask categorical_covariate_keys during training?
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3
|
39
|
October 19, 2022
|
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What is the best way to extract a "full" batch effect corrected count matrix from scVI model?
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1
|
152
|
October 18, 2022
|