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Differential Expression and Batch Correction
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1
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37
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February 20, 2025
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SOLO/scVI .train() error related to batch_size?
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6
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1177
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February 20, 2025
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The mean of the the scVI ZINB model distribution (related to supplementary note 3)
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4
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29
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January 29, 2025
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Tensor nan error when training scANVI model
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6
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681
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January 29, 2025
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How to convert R matrix to anndata
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4
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45
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January 17, 2025
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Error loading someone else's SCVI model: no such file (attr.pkl)
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1
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20
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January 13, 2025
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What training datasets are used in the scVI pretrained model (version 2024-07-01)?
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2
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44
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December 23, 2024
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Issue with model.train() in scVI - Training Stuck at 0%
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1
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40
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December 15, 2024
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CUDA is available but Training scVI models is too slow
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4
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60
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December 4, 2024
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scVI: effect of unbalanced number of cells in batches
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1
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34
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November 27, 2024
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Zero value with scvi normalisation
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1
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22
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November 27, 2024
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Getting the parameters and their names of scVI
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3
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384
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November 27, 2024
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Scvi-tools: different DEGs when comparing same data
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2
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44
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November 19, 2024
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Integrating different tissues with scVI
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3
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105
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November 15, 2024
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scVI 21618 problem
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5
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217
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November 7, 2024
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Iteration consumes memory
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5
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46
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November 7, 2024
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Why totalvi can be used as denoising data?
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1
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25
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November 7, 2024
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New scvi-tools version using SOLO returns probabilities, how to return logits like in version 1.1.2
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7
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103
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July 2, 2024
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Fine-Tuning scVI Model
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2
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69
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October 23, 2024
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Model Training got only 2 epochs
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4
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83
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October 14, 2024
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Is it possible to add extra covariate categories to a trained SCVI model?
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3
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60
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October 4, 2024
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Scvi-tools and xenium
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6
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208
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September 25, 2024
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Embedding number for visualization
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10
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58
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September 23, 2024
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scArches with multiple covariates
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9
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691
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September 22, 2024
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scVI reproducibility seed issue
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4
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774
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September 19, 2024
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Doublet removal: solo model train error
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13
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79
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August 29, 2024
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Pre-defined validation data
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1
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22
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August 27, 2024
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How to compare different parameter sets using the validation loss?
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6
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538
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August 26, 2024
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Scvi - denoising single-cell/single-nucleus transcription data
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3
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169
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August 8, 2024
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scVI integration set batch_key and poor Umap result
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3
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131
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August 7, 2024
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