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Shared cell types not mixing when integrating datasets from different species
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4
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25
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June 19, 2025
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Domain adaptation to pre-train batch correction model using paired data
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12
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88
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May 27, 2025
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scVI batch correction clusters all cells from sample in a circle (potential artifact)
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14
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79
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June 3, 2025
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Scvi package can't be installed into google colab?
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6
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39
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April 20, 2025
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Is the scVI model applicable to bulk RNA-seq data from cell lines?
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1
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46
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April 16, 2025
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How should I calculate the knn entropy using the leiden clusters?
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1
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24
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April 10, 2025
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inferCNVpy after running scVI with batch as key
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5
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753
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March 24, 2025
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Error when running scvi.data.add_dna_sequence
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1
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45
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March 18, 2025
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SysVI model and normalized expression
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1
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66
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March 15, 2025
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Scvi-tools and xenium
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7
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388
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March 13, 2025
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Parameters in training model for integrating datasets with scVI in R
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13
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94
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March 9, 2025
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Issue with scVI model device
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2
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38
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March 3, 2025
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In which direction is the LCF calculated when using the function differential_expression?
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1
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24
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March 2, 2025
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GIMVI genes imputation
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1
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40
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February 26, 2025
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Set of guidelines for SCVI and VisiumHD data
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0
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57
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February 25, 2025
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Differential Expression and Batch Correction
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1
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148
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February 20, 2025
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SOLO/scVI .train() error related to batch_size?
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6
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1282
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February 20, 2025
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The mean of the the scVI ZINB model distribution (related to supplementary note 3)
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4
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46
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January 29, 2025
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Tensor nan error when training scANVI model
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6
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754
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January 29, 2025
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How to convert R matrix to anndata
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4
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82
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January 17, 2025
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Error loading someone else's SCVI model: no such file (attr.pkl)
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1
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30
|
January 13, 2025
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What training datasets are used in the scVI pretrained model (version 2024-07-01)?
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2
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53
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December 23, 2024
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Issue with model.train() in scVI - Training Stuck at 0%
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1
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93
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December 15, 2024
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CUDA is available but Training scVI models is too slow
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4
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114
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December 4, 2024
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scVI: effect of unbalanced number of cells in batches
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1
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54
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November 27, 2024
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Zero value with scvi normalisation
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1
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35
|
November 27, 2024
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Getting the parameters and their names of scVI
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3
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398
|
November 27, 2024
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Scvi-tools: different DEGs when comparing same data
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2
|
80
|
November 19, 2024
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Integrating different tissues with scVI
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3
|
144
|
November 15, 2024
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scVI 21618 problem
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5
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240
|
November 7, 2024
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