totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data
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|
2
|
186
|
January 24, 2023
|
multiVI and totalVI modal integration question
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0
|
73
|
September 15, 2022
|
TotalVI log normalization and non-negativity
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4
|
122
|
September 11, 2022
|
Error in scvi.model.TOTALVI.setup_anndata when loading protein-only data
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5
|
72
|
August 25, 2022
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Advice regarding complex multimodal integration/analysis strategy
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0
|
85
|
July 28, 2022
|
The totalVI DE test; gene names
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2
|
87
|
May 24, 2022
|
ScArches-TotalVI reproducibility
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15
|
188
|
May 19, 2022
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TotalVI- ADT filtering and zero value markers
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0
|
114
|
April 26, 2022
|
All genes or highly variable genes?
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10
|
493
|
March 31, 2022
|
Regressing out isotype controls
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3
|
171
|
March 24, 2022
|
Loading external CITE-seq anndata with argument `mask_protein_batches`?
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1
|
117
|
March 11, 2022
|
totalVI tutorial of integration of CITE-seq datasets in R
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|
2
|
133
|
February 15, 2022
|
TotalVI probabilistic model
|
|
4
|
212
|
November 4, 2021
|
Differentially expressed genes between two Leiden clusters
|
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8
|
313
|
October 15, 2021
|
Comparing steps of Scanpy for scRNQ-seq and totalvi for CITE-seq
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6
|
228
|
October 8, 2021
|
Get_normalized_expression function arguments
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9
|
463
|
September 11, 2021
|
Using TOTALVI with the AUCell package
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|
6
|
188
|
August 17, 2021
|
totalVI workflow
|
|
12
|
228
|
August 1, 2021
|
Preparing data for totalVI
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|
11
|
409
|
July 30, 2021
|
Running TOTALVI data in which subset of cells do not have citeseq data
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|
8
|
267
|
March 25, 2021
|