|
totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data
|
|
2
|
186
|
January 24, 2023
|
|
multiVI and totalVI modal integration question
|
|
0
|
73
|
September 15, 2022
|
|
TotalVI log normalization and non-negativity
|
|
4
|
122
|
September 11, 2022
|
|
Error in scvi.model.TOTALVI.setup_anndata when loading protein-only data
|
|
5
|
72
|
August 25, 2022
|
|
Advice regarding complex multimodal integration/analysis strategy
|
|
0
|
85
|
July 28, 2022
|
|
The totalVI DE test; gene names
|
|
2
|
87
|
May 24, 2022
|
|
ScArches-TotalVI reproducibility
|
|
15
|
188
|
May 19, 2022
|
|
TotalVI- ADT filtering and zero value markers
|
|
0
|
114
|
April 26, 2022
|
|
All genes or highly variable genes?
|
|
10
|
493
|
March 31, 2022
|
|
Regressing out isotype controls
|
|
3
|
171
|
March 24, 2022
|
|
Loading external CITE-seq anndata with argument `mask_protein_batches`?
|
|
1
|
117
|
March 11, 2022
|
|
totalVI tutorial of integration of CITE-seq datasets in R
|
|
2
|
133
|
February 15, 2022
|
|
TotalVI probabilistic model
|
|
4
|
212
|
November 4, 2021
|
|
Differentially expressed genes between two Leiden clusters
|
|
8
|
313
|
October 15, 2021
|
|
Comparing steps of Scanpy for scRNQ-seq and totalvi for CITE-seq
|
|
6
|
228
|
October 8, 2021
|
|
Get_normalized_expression function arguments
|
|
9
|
463
|
September 11, 2021
|
|
Using TOTALVI with the AUCell package
|
|
6
|
188
|
August 17, 2021
|
|
totalVI workflow
|
|
12
|
228
|
August 1, 2021
|
|
Preparing data for totalVI
|
|
11
|
409
|
July 30, 2021
|
|
Running TOTALVI data in which subset of cells do not have citeseq data
|
|
8
|
267
|
March 25, 2021
|