|
About the General category
|
|
0
|
644
|
July 7, 2021
|
|
Inferring whether a particular disease is closer to other?
|
|
0
|
3
|
February 13, 2026
|
|
What to do with small clusters outside larger clusters in UMAP? Remove or keep?
|
|
2
|
16
|
February 10, 2026
|
|
[Tool] scVAE-Annotator: Automated Cell Type Annotation for scRNA-seq with VAE and Adaptive Marker Discovery
|
|
7
|
47
|
February 4, 2026
|
|
Pseudobulk after Performing integration with scatlasvae or scVI?
|
|
4
|
94
|
January 23, 2026
|
|
Proposal: Add TAU Community Detection as a clustering method for Scanpy / scverse ecosystem
|
|
5
|
52
|
December 15, 2025
|
|
Clarification on the random variable W in the decoder
|
|
2
|
49
|
November 11, 2025
|
|
MultiVI questions on Integrating Multiple Multiome Datasets
|
|
1
|
111
|
September 25, 2025
|
|
Preparing adata.uns for cellflow
|
|
0
|
55
|
August 13, 2025
|
|
How to run cellflow faster?
|
|
0
|
61
|
August 7, 2025
|
|
Harmony-R vs Harmony-Py
|
|
0
|
136
|
July 31, 2025
|
|
Deconvolute spatial transcriptomics (visium) with unannotated single-cell (10x)
|
|
3
|
148
|
July 10, 2025
|
|
Cellxgene datasets raw data? scaled?
|
|
2
|
129
|
July 8, 2025
|
|
Regressing out isotype controls
|
|
4
|
883
|
June 6, 2025
|
|
Tutorial Scanpy X ReadStore Integration for NGS Project Management
|
|
0
|
33
|
February 25, 2025
|
|
How to concatenate andata objects when you have citeseq data
|
|
5
|
129
|
January 29, 2025
|
|
Does the order of HTOs matter?
|
|
0
|
73
|
January 7, 2025
|
|
Looking for Pseudobulk Methods
|
|
1
|
173
|
November 17, 2024
|
|
How to load GEO datasets for analysis using Scanpy / Scvi tools?
|
|
6
|
2247
|
November 6, 2024
|
|
Gene Regulatory Network in scverse
|
|
2
|
1236
|
October 20, 2024
|
|
[suggestion] what would be the appropriate pipeline to perform joint embedding of GEX and ATAC?
|
|
1
|
117
|
October 17, 2024
|
|
Release of scvi-tools version 1.2
|
|
1
|
105
|
August 26, 2024
|
|
ST: clustering on each tissue section or clustering on all combined in anndata object?
|
|
0
|
46
|
August 19, 2024
|
|
Teaching resources relating to scverse ecosystem?
|
|
0
|
93
|
August 17, 2024
|
|
Questions about how to do DE with one replicate for one sample
|
|
0
|
265
|
July 31, 2024
|
|
Give your feedback on new visualization tools for Spatial data…
|
|
1
|
90
|
July 25, 2024
|
|
Filtering by coordinate system
|
|
0
|
106
|
May 12, 2024
|
|
Normalizing scATACseq data
|
|
1
|
333
|
April 23, 2024
|
|
Using Git/Github for version control of single cell analysis
|
|
2
|
183
|
April 16, 2024
|
|
Integration of Multiple Multiome Datasets
|
|
5
|
825
|
March 6, 2024
|