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Visualisation of ATAC seq data in Python
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0
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690
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November 21, 2023
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Trajectory inference on multiple samples (e.g. with CellRank)
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0
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290
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November 20, 2023
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Scib-metrics error with "ValueError: Each cell must have the same number of neighbors."
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0
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311
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November 5, 2023
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Training ML model for classifying cell types based on several annotated datasets
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0
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196
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October 25, 2023
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Visualization software compatible with Python/AnnData
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2
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272
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October 18, 2023
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Anndata 0.10 released!
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0
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651
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October 9, 2023
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Imaging data from seurat to scanpy
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1
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958
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October 4, 2023
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DEG pattern while using unspliced and nuclear counts
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0
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221
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July 19, 2023
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Cell-Cell Interactions
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0
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286
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July 5, 2023
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COMPASS Installation tutorial - CPLEX Installation
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0
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299
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June 19, 2023
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Not sure if scvi is using my GPU or not
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7
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1273
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June 13, 2023
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Clustering with scVI latent space
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1
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511
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May 26, 2023
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CiteSeq Tutorial
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0
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463
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May 6, 2023
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Comparing DEGs within same cluster in lineage traced mice
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0
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247
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April 27, 2023
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Got 0 probability for pvals_adj. What mean is this?
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0
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454
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April 7, 2023
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scRNA data integration
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0
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363
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April 6, 2023
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Pseudobulk DE gene Analysis in scverse ecosystem
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10
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2863
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March 30, 2023
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Connectivity score for highly connected cell subtypes
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0
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382
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December 12, 2022
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MultiQC module to parse scanpy/anndata results
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1
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435
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December 1, 2022
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Pathway Analysis
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16
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2415
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November 16, 2022
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Comparing Clusters of Different Anndata through the use of Dendrogram
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2
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994
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November 2, 2022
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DE analysis stochasticity
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6
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510
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October 15, 2022
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Understanding gimVI loss logits
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0
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318
|
October 6, 2022
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Converting h5 to h5ad files?
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2
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4446
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September 29, 2022
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Label transfer from CITE-seq
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5
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504
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September 16, 2022
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Best practices for processing/analyzing large scale scrna-seq datasets across multiple days
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2
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809
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September 15, 2022
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How to convert mouse gene_id to Entrez gene ids
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1
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1200
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August 20, 2022
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Help: My scvi does not work at all
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4
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2243
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August 11, 2022
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Subset/subcluster and reprocess
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0
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1098
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August 3, 2022
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Advice regarding complex multimodal integration/analysis strategy
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0
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404
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July 28, 2022
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