|
Imaging data from seurat to scanpy
|
|
1
|
919
|
October 4, 2023
|
|
DEG pattern while using unspliced and nuclear counts
|
|
0
|
213
|
July 19, 2023
|
|
Cell-Cell Interactions
|
|
0
|
280
|
July 5, 2023
|
|
COMPASS Installation tutorial - CPLEX Installation
|
|
0
|
278
|
June 19, 2023
|
|
Not sure if scvi is using my GPU or not
|
|
7
|
1179
|
June 13, 2023
|
|
Clustering with scVI latent space
|
|
1
|
465
|
May 26, 2023
|
|
CiteSeq Tutorial
|
|
0
|
439
|
May 6, 2023
|
|
Comparing DEGs within same cluster in lineage traced mice
|
|
0
|
237
|
April 27, 2023
|
|
Got 0 probability for pvals_adj. What mean is this?
|
|
0
|
434
|
April 7, 2023
|
|
scRNA data integration
|
|
0
|
346
|
April 6, 2023
|
|
Pseudobulk DE gene Analysis in scverse ecosystem
|
|
10
|
2294
|
March 30, 2023
|
|
Connectivity score for highly connected cell subtypes
|
|
0
|
367
|
December 12, 2022
|
|
MultiQC module to parse scanpy/anndata results
|
|
1
|
411
|
December 1, 2022
|
|
Pathway Analysis
|
|
16
|
2113
|
November 16, 2022
|
|
Comparing Clusters of Different Anndata through the use of Dendrogram
|
|
2
|
960
|
November 2, 2022
|
|
DE analysis stochasticity
|
|
6
|
488
|
October 15, 2022
|
|
Understanding gimVI loss logits
|
|
0
|
309
|
October 6, 2022
|
|
Converting h5 to h5ad files?
|
|
2
|
4167
|
September 29, 2022
|
|
Label transfer from CITE-seq
|
|
5
|
480
|
September 16, 2022
|
|
Best practices for processing/analyzing large scale scrna-seq datasets across multiple days
|
|
2
|
678
|
September 15, 2022
|
|
How to convert mouse gene_id to Entrez gene ids
|
|
1
|
1147
|
August 20, 2022
|
|
Help: My scvi does not work at all
|
|
4
|
2134
|
August 11, 2022
|
|
Subset/subcluster and reprocess
|
|
0
|
1048
|
August 3, 2022
|
|
Advice regarding complex multimodal integration/analysis strategy
|
|
0
|
388
|
July 28, 2022
|
|
Question about the markergene score
|
|
0
|
310
|
July 20, 2022
|
|
Scanpy Ingest Understanding
|
|
0
|
805
|
July 8, 2022
|
|
HVG selection with multiple batches
|
|
3
|
971
|
July 4, 2022
|
|
UMI tables using scanpy
|
|
3
|
658
|
June 29, 2022
|
|
Kallisto feature.tsv file?
|
|
0
|
325
|
June 28, 2022
|
|
Cell type assigning software/package compatible with scanpy
|
|
1
|
373
|
June 18, 2022
|