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Imaging data from seurat to scanpy
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1
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919
|
October 4, 2023
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DEG pattern while using unspliced and nuclear counts
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0
|
214
|
July 19, 2023
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Cell-Cell Interactions
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0
|
280
|
July 5, 2023
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COMPASS Installation tutorial - CPLEX Installation
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0
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278
|
June 19, 2023
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Not sure if scvi is using my GPU or not
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7
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1179
|
June 13, 2023
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Clustering with scVI latent space
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1
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465
|
May 26, 2023
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CiteSeq Tutorial
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0
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439
|
May 6, 2023
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Comparing DEGs within same cluster in lineage traced mice
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0
|
237
|
April 27, 2023
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Got 0 probability for pvals_adj. What mean is this?
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0
|
434
|
April 7, 2023
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scRNA data integration
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0
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347
|
April 6, 2023
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Pseudobulk DE gene Analysis in scverse ecosystem
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10
|
2302
|
March 30, 2023
|
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Connectivity score for highly connected cell subtypes
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0
|
367
|
December 12, 2022
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MultiQC module to parse scanpy/anndata results
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1
|
411
|
December 1, 2022
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Pathway Analysis
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16
|
2115
|
November 16, 2022
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Comparing Clusters of Different Anndata through the use of Dendrogram
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2
|
961
|
November 2, 2022
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DE analysis stochasticity
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6
|
488
|
October 15, 2022
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Understanding gimVI loss logits
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0
|
309
|
October 6, 2022
|
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Converting h5 to h5ad files?
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2
|
4170
|
September 29, 2022
|
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Label transfer from CITE-seq
|
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5
|
480
|
September 16, 2022
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Best practices for processing/analyzing large scale scrna-seq datasets across multiple days
|
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2
|
678
|
September 15, 2022
|
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How to convert mouse gene_id to Entrez gene ids
|
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1
|
1147
|
August 20, 2022
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Help: My scvi does not work at all
|
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4
|
2135
|
August 11, 2022
|
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Subset/subcluster and reprocess
|
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0
|
1048
|
August 3, 2022
|
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Advice regarding complex multimodal integration/analysis strategy
|
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0
|
388
|
July 28, 2022
|
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Question about the markergene score
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0
|
310
|
July 20, 2022
|
|
Scanpy Ingest Understanding
|
|
0
|
805
|
July 8, 2022
|
|
HVG selection with multiple batches
|
|
3
|
971
|
July 4, 2022
|
|
UMI tables using scanpy
|
|
3
|
658
|
June 29, 2022
|
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Kallisto feature.tsv file?
|
|
0
|
325
|
June 28, 2022
|
|
Cell type assigning software/package compatible with scanpy
|
|
1
|
373
|
June 18, 2022
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