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Label transfer from CITE-seq
|
|
5
|
577
|
September 16, 2022
|
|
Best practices for processing/analyzing large scale scrna-seq datasets across multiple days
|
|
2
|
1002
|
September 15, 2022
|
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How to convert mouse gene_id to Entrez gene ids
|
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1
|
1246
|
August 20, 2022
|
|
Help: My scvi does not work at all
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4
|
2368
|
August 11, 2022
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Subset/subcluster and reprocess
|
|
0
|
1151
|
August 3, 2022
|
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Advice regarding complex multimodal integration/analysis strategy
|
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0
|
469
|
July 28, 2022
|
|
Question about the markergene score
|
|
0
|
347
|
July 20, 2022
|
|
Scanpy Ingest Understanding
|
|
0
|
846
|
July 8, 2022
|
|
HVG selection with multiple batches
|
|
3
|
1245
|
July 4, 2022
|
|
UMI tables using scanpy
|
|
3
|
765
|
June 29, 2022
|
|
Kallisto feature.tsv file?
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|
0
|
341
|
June 28, 2022
|
|
Cell type assigning software/package compatible with scanpy
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|
1
|
397
|
June 18, 2022
|
|
Batch correction with covariate preservation
|
|
2
|
834
|
June 13, 2022
|
|
Prediction of the protein expression based on snRNA-seq
|
|
1
|
461
|
June 6, 2022
|
|
Plot subsamples in the Anndata
|
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0
|
349
|
June 2, 2022
|
|
Scvi-tools in DE benchmarking papers?
|
|
2
|
449
|
May 27, 2022
|
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plot different sample regions and different age groups from AnnDat
|
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0
|
399
|
May 24, 2022
|
|
Using seurat weigted nearest neighbord graph to compute a Force-directed graph
|
|
2
|
729
|
May 23, 2022
|
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Adding trend line to scatter plot?
|
|
1
|
1008
|
May 7, 2022
|
|
Reading in a 1.1 million cell HDF5 dataset
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4
|
1315
|
March 26, 2022
|
|
Differential expression of ADT protein
|
|
0
|
453
|
March 14, 2022
|
|
Error in sc.pl.violin with totalVI
|
|
0
|
454
|
March 14, 2022
|
|
Summarizing a multipatient experimental design
|
|
0
|
525
|
September 8, 2021
|
|
Data preprocessing for scATAC-seq
|
|
4
|
1288
|
September 10, 2021
|
|
Gene filtering prior to batch correction
|
|
2
|
894
|
July 9, 2021
|
|
Minimum Cluster Size?
|
|
2
|
589
|
July 8, 2021
|