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Issue with multiVI get_normalized_expression and get_normalized_accessibility
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5
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135
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December 7, 2025
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Question about complex experiment
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1
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93
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November 25, 2025
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MultiVI questions on Integrating Multiple Multiome Datasets
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1
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146
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September 25, 2025
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multiVI speed and cpu consumption
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2
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95
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August 30, 2025
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Does MultiVI support using tile matrix directly instead of peak calling for ATAC input?
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2
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112
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July 9, 2025
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Protocol for model optimization (currently focused on MultiVI)
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3
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680
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May 14, 2025
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[suggestion] what would be the appropriate pipeline to perform joint embedding of GEX and ATAC?
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1
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131
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October 17, 2024
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Scvi.data.organize_multiome_anndatas with two big anndata objects
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1
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220
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May 3, 2024
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Integration of Multiple Multiome Datasets
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5
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877
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March 6, 2024
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How to compute the integration metrics
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1
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259
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February 16, 2024
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MultiVI size factor for multiple modalities
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0
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270
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November 24, 2023
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Nonsense UMAP when including categorical covariates in a MULTIVI model
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1
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347
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August 28, 2023
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"ValueError: cannot specify integer `bins` when input data contains infinity" in multi sample data
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6
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5122
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June 27, 2023
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Dataset integration and analysis
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3
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980
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May 3, 2023
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totalVI, peakVI, multiVI with scRNA-seq and scATAC-seq data
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3
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900
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March 9, 2023
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3 sets of CITE-Seq data, how to concatenate or make single file for further analysis?
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0
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510
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February 7, 2023
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Anndata.concatenate() with two 10x multiome datasets?
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2
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719
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December 29, 2022
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How to dynamically mask categorical_covariate_keys during training?
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3
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412
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October 19, 2022
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Clarification on unpaired data smoothing during MultiVI `training_step()`?
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0
|
304
|
October 7, 2022
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multiVI and totalVI modal integration question
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0
|
542
|
September 15, 2022
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Advice regarding complex multimodal integration/analysis strategy
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0
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464
|
July 28, 2022
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How to impute the modality (like ATAC) when I only have the other modality (RNA) using a pre-trained MultiVI?
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5
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426
|
July 1, 2022
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Labels_key not available for scvi.model.MULTIVI.setup_anndata()
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3
|
505
|
March 1, 2022
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Reference mapping with MultiVI
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0
|
435
|
January 25, 2022
|
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Integrate multiple samples for paired multi-omics data
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|
1
|
663
|
February 15, 2022
|
|
MULTIVI training fails before first epoch
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1
|
549
|
December 16, 2021
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MultiVi with multiple GPUs and CPUs
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|
2
|
1162
|
December 2, 2021
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