|
Limited cell types in reference dataset for scANVI
|
|
3
|
23
|
December 4, 2025
|
|
Predict cell type with scANVI for spatial transcriptomics data (Xenium)
|
|
6
|
105
|
November 27, 2025
|
|
Loss_z1_weight and loss_z1_unweight in scANVI
|
|
3
|
492
|
November 25, 2025
|
|
Posterior probability interpretability (soft=True)
|
|
1
|
55
|
September 25, 2025
|
|
Get_normalized_expression causes my kernel to disconnect
|
|
1
|
46
|
August 19, 2025
|
|
Nan values in the latent of scanvi_query
|
|
1
|
54
|
April 23, 2025
|
|
Unexpected exception formatting exception when prepare_query_anndata
|
|
4
|
216
|
March 11, 2025
|
|
Issue with retrain scANVI model
|
|
1
|
92
|
March 3, 2025
|
|
Function in scanvi that can help compute the probability of having a latent cell state given a cell type
|
|
1
|
84
|
February 26, 2025
|
|
Tensor nan error when training scANVI model
|
|
6
|
836
|
January 29, 2025
|
|
Transferring lables from refrence dataset to query dataset with a more diverse cell population using scANVI
|
|
8
|
206
|
October 17, 2024
|
|
SCANVI inferred cell types don't make sense
|
|
1
|
151
|
October 17, 2024
|
|
Is it possible to add extra covariate categories to a trained SCVI model?
|
|
3
|
165
|
October 4, 2024
|
|
SCANVI: Label transfer from in vivo reference to in vitro model?
|
|
4
|
721
|
September 15, 2024
|
|
How to assess scanvi annoation transfer effect
|
|
1
|
67
|
September 6, 2024
|
|
Trajectory analysis of combined single-cell and single-nuclei data
|
|
1
|
422
|
September 2, 2024
|
|
SCVI and SCANVI for label transfer how to assess accuracy?
|
|
3
|
288
|
August 20, 2024
|
|
Different UMAPs for same dataset with scANVI
|
|
6
|
285
|
July 22, 2024
|
|
The output of scANVI
|
|
2
|
211
|
June 19, 2024
|
|
How to create scANVI model from a scVI model without labels_key?
|
|
2
|
161
|
June 5, 2024
|
|
Computing neighbors from X_scANVI representation
|
|
5
|
466
|
April 26, 2024
|
|
Benchmarking CellHint with scib-metrics Benchmarker tool how to use embedding_obsm_keys
|
|
1
|
212
|
April 25, 2024
|
|
Encountering Error in Label Transfer : Query Dataset Slightly Larger than Reference Dataset
|
|
3
|
293
|
January 11, 2024
|
|
Predicting of unassigned cells using scANVI
|
|
0
|
316
|
December 10, 2023
|
|
Error in Fine-tuning scANVI Hyperparameters from Pretrained scVI Model
|
|
2
|
452
|
November 20, 2023
|
|
Multi-omics scANVI
|
|
1
|
255
|
November 14, 2023
|
|
Error in Atlas-level-integration-of-lung-data Tutorial
|
|
4
|
441
|
November 1, 2023
|
|
Label transfer with SCVI-SCANVI pipeline changes (predicts wrong) labels in ref data
|
|
8
|
1143
|
July 31, 2023
|
|
Supervised training with scanvi does not converge, any clue why?
|
|
0
|
348
|
July 4, 2023
|
|
Scvi-tools label transfer accuracy
|
|
2
|
590
|
June 15, 2023
|