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Transferring lables from refrence dataset to query dataset with a more diverse cell population using scANVI
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1
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5
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July 25, 2024
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Different UMAPs for same dataset with scANVI
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6
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25
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July 22, 2024
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The output of scANVI
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2
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101
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June 19, 2024
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How to create scANVI model from a scVI model without labels_key?
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2
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81
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June 5, 2024
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Computing neighbors from X_scANVI representation
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5
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250
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April 26, 2024
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Benchmarking CellHint with scib-metrics Benchmarker tool how to use embedding_obsm_keys
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1
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119
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April 25, 2024
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Encountering Error in Label Transfer : Query Dataset Slightly Larger than Reference Dataset
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3
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210
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January 11, 2024
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Trajectory analysis of combined single-cell and single-nuclei data
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0
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228
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December 13, 2023
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Predicting of unassigned cells using scANVI
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0
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206
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December 10, 2023
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Error in Fine-tuning scANVI Hyperparameters from Pretrained scVI Model
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2
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327
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November 20, 2023
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Multi-omics scANVI
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1
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182
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November 14, 2023
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Error in Atlas-level-integration-of-lung-data Tutorial
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4
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332
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November 1, 2023
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Tensor nan error when training scANVI model
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0
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553
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August 11, 2023
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Label transfer with SCVI-SCANVI pipeline changes (predicts wrong) labels in ref data
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8
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749
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July 31, 2023
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Supervised training with scanvi does not converge, any clue why?
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0
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289
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July 4, 2023
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Scvi-tools label transfer accuracy
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2
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446
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June 15, 2023
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scANVI relables known cells with known types incorrectly
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13
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1617
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April 18, 2023
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Don't extend labels for query data
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1
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292
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March 6, 2023
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3 sets of CITE-Seq data, how to concatenate or make single file for further analysis?
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0
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416
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February 7, 2023
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Scanvi best practices
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6
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1263
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November 28, 2022
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scANVI fails and returns NaNs after few epochs
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2
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522
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November 11, 2022
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SCANVI: cannot reproduce predicted cell types as in the tutorial
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1
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436
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October 5, 2022
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Label transfer from CITE-seq
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5
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444
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September 16, 2022
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SCANVI soft labeling
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1
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826
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August 8, 2022
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Advice regarding complex multimodal integration/analysis strategy
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0
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360
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July 28, 2022
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Error in SCANVI.prepare_query_anndata
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5
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805
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July 14, 2022
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Error on scvi_model.train(100) for seed label transfer
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1
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2019
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June 8, 2022
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Error in scvi.model.SCANVI.load_query_data
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2
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466
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June 3, 2022
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SCANVI: Label transfer from adult to embryonic data?
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1
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376
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May 17, 2022
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Semi supervised integration update
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2
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357
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May 3, 2022
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