|
About the Ecosystem category
|
|
0
|
697
|
March 4, 2022
|
|
ImportError: cannot import name 'run_regression' from 'cell2location'
|
|
3
|
591
|
October 15, 2025
|
|
Use of raw or log-normalised counts in decoupler-py mt.ulm
|
|
1
|
62
|
September 12, 2025
|
|
How to handle batch effects within the query dataset when using scArches + SCVI?
|
|
1
|
54
|
July 31, 2025
|
|
Understanding NMF output "mean_nUMI_factorsfact"
|
|
0
|
45
|
June 24, 2025
|
|
Interpretation of differences between pseudotime and velocity stream
|
|
0
|
32
|
March 17, 2025
|
|
Num samples in export posterior for Visium HD
|
|
0
|
95
|
October 3, 2024
|
|
Handling Non-Matching Categorical Labels in scArches
|
|
0
|
29
|
September 13, 2024
|
|
Trajectory analysis of combined single-cell and single-nuclei data
|
|
1
|
386
|
September 2, 2024
|
|
Comparing cell type abundance acroos samples calculated in differnt runs
|
|
0
|
242
|
December 7, 2023
|
|
Save and read a GPCCA kernel object
|
|
1
|
297
|
October 31, 2023
|
|
Error running veloVI when trying to add veloVI outputs to adata
|
|
1
|
774
|
September 25, 2023
|
|
Spatialdata status
|
|
2
|
359
|
May 16, 2023
|
|
Plotting spatialdata in only one coordinate system
|
|
2
|
367
|
May 15, 2023
|
|
Scanorama embeddings on CellRank analysis
|
|
0
|
349
|
May 11, 2023
|
|
Error when running compute_transition_matrix()
|
|
0
|
227
|
May 5, 2023
|
|
Possible to distinguish directionality per condition in cytotrace?
|
|
2
|
381
|
May 2, 2023
|
|
Selecting Optimal Training Epochs for Cell2location
|
|
0
|
447
|
April 16, 2023
|
|
Further explanation of q05_cell_abundance_w_sf values
|
|
1
|
913
|
March 17, 2023
|
|
Question about adjacent normal liver
|
|
1
|
414
|
February 27, 2023
|
|
Questions about Cell2location mathematics model
|
|
2
|
508
|
February 27, 2023
|
|
Get more from differential kinetic testing In scvelo
|
|
0
|
315
|
February 7, 2023
|
|
Extract high likelihood genes identified in latent time
|
|
0
|
466
|
December 6, 2022
|
|
Questions about Cell2location
|
|
0
|
702
|
November 17, 2022
|
|
Adding "equipment" to AnnData objects for neat addition of functionality
|
|
3
|
461
|
November 1, 2022
|
|
Cell Rank Data Set requirements
|
|
1
|
423
|
October 23, 2022
|
|
RNA velocity - pancreas dataset preprocessing
|
|
0
|
522
|
August 31, 2022
|
|
Setting up a fully featured GPU single cell enviroment
|
|
2
|
1002
|
August 24, 2022
|
|
Freezing layers: register_hook vs. requires_grad
|
|
1
|
448
|
July 3, 2022
|
|
Two root for the pseudotime?
|
|
3
|
758
|
June 20, 2022
|