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About the Ecosystem category
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0
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708
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March 4, 2022
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Need to compare cell2location (probabilistic approach for deconvolution) to celltrek (spatial mapping approach)
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0
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21
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March 4, 2026
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Use of raw or log-normalised counts in decoupler-py mt.ulm
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2
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153
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January 17, 2026
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ImportError: cannot import name 'run_regression' from 'cell2location'
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3
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627
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October 15, 2025
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How to handle batch effects within the query dataset when using scArches + SCVI?
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1
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137
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July 31, 2025
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Understanding NMF output "mean_nUMI_factorsfact"
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0
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100
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June 24, 2025
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Interpretation of differences between pseudotime and velocity stream
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0
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76
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March 17, 2025
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Num samples in export posterior for Visium HD
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0
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171
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October 3, 2024
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Handling Non-Matching Categorical Labels in scArches
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0
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60
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September 13, 2024
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Trajectory analysis of combined single-cell and single-nuclei data
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1
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492
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September 2, 2024
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Comparing cell type abundance acroos samples calculated in differnt runs
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0
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281
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December 7, 2023
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Save and read a GPCCA kernel object
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1
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353
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October 31, 2023
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Error running veloVI when trying to add veloVI outputs to adata
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1
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818
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September 25, 2023
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Spatialdata status
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2
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375
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May 16, 2023
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Plotting spatialdata in only one coordinate system
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2
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389
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May 15, 2023
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Scanorama embeddings on CellRank analysis
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0
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388
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May 11, 2023
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Error when running compute_transition_matrix()
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0
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255
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May 5, 2023
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Possible to distinguish directionality per condition in cytotrace?
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2
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417
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May 2, 2023
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Selecting Optimal Training Epochs for Cell2location
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0
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513
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April 16, 2023
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Further explanation of q05_cell_abundance_w_sf values
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1
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1050
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March 17, 2023
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Question about adjacent normal liver
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1
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445
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February 27, 2023
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Questions about Cell2location mathematics model
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2
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557
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February 27, 2023
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Get more from differential kinetic testing In scvelo
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0
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351
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February 7, 2023
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Extract high likelihood genes identified in latent time
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0
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499
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December 6, 2022
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Questions about Cell2location
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0
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723
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November 17, 2022
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Adding "equipment" to AnnData objects for neat addition of functionality
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3
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503
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November 1, 2022
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Cell Rank Data Set requirements
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1
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454
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October 23, 2022
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RNA velocity - pancreas dataset preprocessing
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0
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558
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August 31, 2022
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Setting up a fully featured GPU single cell enviroment
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2
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1134
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August 24, 2022
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Freezing layers: register_hook vs. requires_grad
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1
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490
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July 3, 2022
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