Topic	Replies	Views	Activity
Benchmarking CellHint with scib-metrics Benchmarker tool how to use embedding_obsm_keys Help scrna-seq , integration , scanvi , scvi	0	29	April 12, 2024
Access to each training example's original index in the input Anndata object scvi-tools scrna-seq , integration , scvi , developer	0	62	March 12, 2024
Can I use the package scib-metrics on methods that don't output an embedding? Help scrna-seq , integration	2	100	February 27, 2024
Is it possible only to calculate metrics related to cell type using scib? Help scrna-seq	1	175	August 15, 2023
Could not find function "scvi.model.SCVI.setup_anndata" scvi-tools scrna-seq , integration , scvi	0	291	July 29, 2023
Show cluster numbers on scanpy UMAP plot like in Featureplot in Seurat scanpy scrna-seq , plotting	5	1493	June 16, 2023
Plotting scanpy.tl.score_genes() value using scanpy.pl.stacked_violin() scanpy scrna-seq	1	701	November 4, 2022
How to concatenate anndata properly? anndata scrna-seq , integration , scvi	2	4884	November 3, 2022
How does one generate a DotPlot with scaled values? scanpy scrna-seq , plotting	0	565	August 29, 2022
Error in highly variable gene selection scanpy scrna-seq , gene-selection	8	2424	March 21, 2022
Gene filtering prior to batch correction scRNA-seq scrna-seq , integration	2	559	July 9, 2021
Minimum Cluster Size? scRNA-seq scrna-seq	2	431	July 8, 2021

scrna-seq