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Failing to import SCVI-tools modules: has AnnDatasetFromAnnData been replaced?
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2
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34
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June 27, 2024
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Spatial resolution artifacts outside of detected tissue
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8
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80
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June 24, 2024
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Error in py_call_impl(callable, call_args$unnamed, call_args$named)
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0
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60
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June 24, 2024
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Spatialdata wrong shapes translation
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8
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75
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June 21, 2024
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Akoya Pheno/CODEX data
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5
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725
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June 21, 2024
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Cellranger_aggr data
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1
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45
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June 19, 2024
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The output of scANVI
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2
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101
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June 19, 2024
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Differential expression with scvi - batch correction?
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1
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93
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June 19, 2024
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Stitching CoxMx data fovs
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0
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34
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June 18, 2024
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Any existing effort to port squidpy functionalities to R?
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1
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188
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June 12, 2024
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Visium normalization best practices
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5
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754
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June 11, 2024
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Question about differential expression and the batch_correction usage
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0
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106
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June 7, 2024
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UMAP plot colors problem
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2
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122
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June 6, 2024
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Best way to rank genes for GSEA analysis
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3
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660
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June 5, 2024
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scVI 21618 problem
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2
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142
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June 5, 2024
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How to create scANVI model from a scVI model without labels_key?
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2
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81
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June 5, 2024
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Cannot load filtered_contig_annotations.csv
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4
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156
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June 4, 2024
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Reproducing scib-metrics usage after API change
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2
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71
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June 3, 2024
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Issues running the updated version of MrVI
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1
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138
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June 3, 2024
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mrVI hyperparameter tunning
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3
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285
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June 3, 2024
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Documentation for training with multiple GPUs
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2
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74
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May 31, 2024
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Error loading previously saved scVI model after updating packages / cloud environment
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5
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111
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May 31, 2024
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SCVI tools with large datasets
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3
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406
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May 31, 2024
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Saving scCODA proportion data to a csv in Pertpy
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2
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156
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May 29, 2024
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Add & plot cell type annotation to spatialdata
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3
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91
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May 29, 2024
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How to do an sketch in an anndata object?
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1
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77
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May 23, 2024
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How to find DE genes between different datasets?
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1
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117
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May 22, 2024
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Training split conditioned on batch_key
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3
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115
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May 22, 2024
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With `data_module`, how do I get the `adata_manager`?
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0
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61
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May 22, 2024
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Produce clonotype abundance barplot based on ir.pl.group_abundance by order of normalised abundance
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3
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62
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May 17, 2024
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