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Using low precision matrix multiplication to boost performance
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6
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54
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October 17, 2024
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Model Training got only 2 epochs
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4
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38
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October 14, 2024
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Trouble integrating my dataset into a reference dataset
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16
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117
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October 11, 2024
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Cluster boundary identification
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0
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11
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October 10, 2024
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Error reading HDF5 file in MuData/AnnData
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2
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24
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October 6, 2024
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Is it possible to add extra covariate categories to a trained SCVI model?
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3
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47
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October 4, 2024
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Scanpy.pl.rank_genes_groups_dotplot doesn't plot gene symbols in adata.var_names
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0
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29
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September 30, 2024
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Convert Scanpy (h5ad) to Seurat (rds)
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9
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11660
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September 27, 2024
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Error in MrVI differential abundance
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1
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26
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September 27, 2024
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How can I process anndata using multiprocessing?
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2
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33
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September 27, 2024
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Scale for predicted vs observed plot in SCVI-SCANVI mapping?
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2
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25
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September 25, 2024
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Scvi-tools and xenium
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6
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108
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September 25, 2024
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scVI with large datasets
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4
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60
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September 24, 2024
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Daf (Data in Axes in Formats)
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0
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13
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September 24, 2024
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ZeroDivisionError using scvi-tools
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15
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65
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September 23, 2024
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Embedding number for visualization
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10
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41
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September 23, 2024
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scArches with multiple covariates
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9
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628
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September 22, 2024
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Ambient RNA removal before TotalVI?
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1
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19
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September 22, 2024
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Sc.pp.regress_out() with large datasets
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0
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39
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September 19, 2024
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scVI reproducibility seed issue
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4
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703
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September 19, 2024
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Cell charter niche calling
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4
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144
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September 19, 2024
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VeloVI model formulation
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0
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18
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September 18, 2024
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SCANVI: Label transfer from in vivo reference to in vitro model?
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4
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663
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September 15, 2024
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[Usage clarification] Should the .obs in query and reference be exactly the same?
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2
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16
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September 13, 2024
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How is the scArches scvi/scanvi pipeline different from the one on SCVI tutorials?
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0
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25
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September 13, 2024
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Weird UMAP after running scVI
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6
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96
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September 12, 2024
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Split dotplot by condition
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0
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23
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September 12, 2024
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Trouble Making a Z-Score Heatmap
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2
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937
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September 11, 2024
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Macbook M1 M2 mps acceleration with scVI
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7
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1186
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September 10, 2024
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Loosing anndata .var layer when using sc.concat?
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3
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747
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September 9, 2024
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