|
About the spatialdata category
|
|
0
|
260
|
May 16, 2023
|
|
[moved] How to align image to cropped data, visualize with Xenium Explorer
|
|
1
|
34
|
July 2, 2024
|
|
Spatial resolution artifacts outside of detected tissue
|
|
8
|
80
|
June 24, 2024
|
|
Spatialdata wrong shapes translation
|
|
8
|
75
|
June 21, 2024
|
|
Add & plot cell type annotation to spatialdata
|
|
3
|
91
|
May 29, 2024
|
|
Remove coordinate system from Spatialdata
|
|
1
|
118
|
April 9, 2024
|
|
Napari_spatialdata colouring cell_labels and plotting specific transcripts
|
|
1
|
151
|
April 5, 2024
|
|
View xenium images in napari
|
|
5
|
160
|
February 25, 2024
|
|
Using my own datasets with spatialData
|
|
9
|
210
|
February 8, 2024
|
|
Importing cellcharter
|
|
1
|
119
|
January 22, 2024
|
|
Create SpatialData from Akoya Phenocycler qptiff
|
|
5
|
333
|
December 5, 2023
|
|
Save layer back to spatialdata from napari
|
|
6
|
295
|
November 15, 2023
|
|
Deconvolute spatial (Visium) using a bulk RNA-seq dataset
|
|
1
|
266
|
September 26, 2023
|
|
How to implement MonkeyBread pipeline for Visium spatial data
|
|
4
|
284
|
August 22, 2023
|
|
Need help with the napari.spatialdata Interactive() function
|
|
3
|
284
|
August 7, 2023
|
|
Unexpected Coordinate Values with Image2DModel
|
|
5
|
251
|
July 15, 2023
|
|
Composing transformations
|
|
1
|
225
|
June 22, 2023
|
|
Can I aggregate images and data by shapes?
|
|
3
|
261
|
June 22, 2023
|
|
MERFISH data analysis from scratch
|
|
2
|
485
|
June 4, 2023
|
|
Dealing with multiple samples
|
|
1
|
339
|
May 31, 2023
|