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Issue with scVI model device
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2
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35
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March 3, 2025
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In which direction is the LCF calculated when using the function differential_expression?
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1
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24
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March 2, 2025
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GIMVI genes imputation
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1
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36
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February 26, 2025
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Function in scanvi that can help compute the probability of having a latent cell state given a cell type
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1
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27
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February 26, 2025
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Set of guidelines for SCVI and VisiumHD data
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0
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52
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February 25, 2025
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Differential Expression and Batch Correction
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1
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125
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February 20, 2025
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SOLO/scVI .train() error related to batch_size?
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6
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1267
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February 20, 2025
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Question about interpreting the DEGs associated with disease changes using MrVI
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2
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53
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February 11, 2025
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Ablating latent variables in LinearSCVI
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3
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38
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February 6, 2025
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TotalVI not fully integrating CITEseq cells with GEX and missing protein values
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1
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30
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February 6, 2025
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Differential gene expression shows very low raw_means
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2
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33
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January 30, 2025
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The mean of the the scVI ZINB model distribution (related to supplementary note 3)
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4
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42
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January 29, 2025
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How to appropriately transfer annotations from anndata to seurat
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2
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142
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January 24, 2025
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Best practice for handling custom points during SCVI training
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4
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60
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January 24, 2025
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Workflow to integrate dataset from two different species
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1
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90
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January 21, 2025
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Scvi embedding from Census API by CellxGene
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1
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28
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January 20, 2025
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Model cannot be initialized and return error
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6
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60
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January 15, 2025
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Error loading someone else's SCVI model: no such file (attr.pkl)
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1
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30
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January 13, 2025
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Impact of batch on TotalVI results
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1
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64
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January 5, 2025
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Differential expression analysis
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4
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709
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January 5, 2025
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What training datasets are used in the scVI pretrained model (version 2024-07-01)?
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2
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53
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December 23, 2024
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Issue with model.train() in scVI - Training Stuck at 0%
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1
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87
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December 15, 2024
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Train scVI on a sampled dataset
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8
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109
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December 6, 2024
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Error loading previously saved scVI model after updating packages / cloud environment
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6
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503
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December 5, 2024
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CUDA is available but Training scVI models is too slow
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4
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104
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December 4, 2024
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scVI: effect of unbalanced number of cells in batches
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1
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50
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November 27, 2024
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Zero value with scvi normalisation
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1
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28
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November 27, 2024
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Getting the parameters and their names of scVI
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3
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397
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November 27, 2024
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Scvi-tools: different DEGs when comparing same data
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2
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74
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November 19, 2024
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Error training MrVI: Backend 'cuda' failed to initialize
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2
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100
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November 18, 2024
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