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Differential gene expression shows very low raw_means
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2
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53
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January 30, 2025
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The mean of the the scVI ZINB model distribution (related to supplementary note 3)
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4
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82
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January 29, 2025
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How to appropriately transfer annotations from anndata to seurat
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2
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301
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January 24, 2025
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Best practice for handling custom points during SCVI training
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4
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75
|
January 24, 2025
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Workflow to integrate dataset from two different species
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1
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127
|
January 21, 2025
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Scvi embedding from Census API by CellxGene
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1
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43
|
January 20, 2025
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Model cannot be initialized and return error
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6
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88
|
January 15, 2025
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Error loading someone else's SCVI model: no such file (attr.pkl)
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1
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35
|
January 13, 2025
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Impact of batch on TotalVI results
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1
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85
|
January 5, 2025
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Differential expression analysis
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4
|
889
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January 5, 2025
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What training datasets are used in the scVI pretrained model (version 2024-07-01)?
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2
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78
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December 23, 2024
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Issue with model.train() in scVI - Training Stuck at 0%
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1
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155
|
December 15, 2024
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Train scVI on a sampled dataset
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8
|
207
|
December 6, 2024
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Error loading previously saved scVI model after updating packages / cloud environment
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6
|
600
|
December 5, 2024
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CUDA is available but Training scVI models is too slow
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4
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194
|
December 4, 2024
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scVI: effect of unbalanced number of cells in batches
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1
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83
|
November 27, 2024
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Zero value with scvi normalisation
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1
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44
|
November 27, 2024
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Getting the parameters and their names of scVI
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3
|
418
|
November 27, 2024
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Scvi-tools: different DEGs when comparing same data
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2
|
126
|
November 19, 2024
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Error training MrVI: Backend 'cuda' failed to initialize
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2
|
154
|
November 18, 2024
|
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Integrating different tissues with scVI
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|
3
|
185
|
November 15, 2024
|
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Integration with or without covariate
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|
1
|
99
|
November 11, 2024
|
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scVI 21618 problem
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|
5
|
283
|
November 7, 2024
|
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Iteration consumes memory
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|
5
|
98
|
November 7, 2024
|
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Inconsistency of scvi/SOLO in predicting doublets?
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5
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44
|
November 7, 2024
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Why totalvi can be used as denoising data?
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1
|
85
|
November 7, 2024
|
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New scvi-tools version using SOLO returns probabilities, how to return logits like in version 1.1.2
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7
|
133
|
July 2, 2024
|
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Autotune failed due to "h5py objects cannot be pickled"
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4
|
111
|
October 23, 2024
|
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Transferring lables from refrence dataset to query dataset with a more diverse cell population using scANVI
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|
8
|
167
|
October 17, 2024
|
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SCANVI inferred cell types don't make sense
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1
|
124
|
October 17, 2024
|