Error in Fine-tuning scANVI Hyperparameters from Pretrained scVI Model
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2
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202
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November 20, 2023
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Vae_q.latent_space_classifer_ not found in totalVI CITE-seq reference mapping tutorial
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3
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129
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November 20, 2023
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Input to scvi encoder
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4
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406
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November 14, 2023
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Multi-omics scANVI
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1
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115
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November 14, 2023
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Raw count input for scVI cell clustering
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2
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186
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November 8, 2023
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mrVI hyperparameter tunning
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2
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170
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October 25, 2023
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Increase scVI integration speed
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5
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421
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October 24, 2023
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scVI integration using two batch keys
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5
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461
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October 24, 2023
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RuntimeWarning: The lr scheduler dict contains the key(s)
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0
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164
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October 23, 2023
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Is it possible to get the saved model from h5ad file?
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3
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230
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October 17, 2023
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Mrvi error because of LossRecorder to LossOutput change
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1
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177
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October 12, 2023
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Model doesn't contain validation metrics
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7
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253
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October 12, 2023
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Enviroment.yml file? scvi installation problems
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8
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550
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October 11, 2023
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Error message cannot import name 'set_verbosity' from 'scvi._settings' when importing scvi
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6
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647
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October 9, 2023
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Query about transfer learning / scArches in SCVI
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0
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152
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October 7, 2023
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Re-integration after subseting cluster
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2
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271
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September 26, 2023
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Sequential scArches
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0
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181
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September 24, 2023
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How to install solo-sc or use hashsolo from scvi?
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4
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433
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September 11, 2023
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Get var_names used for training SCVI model
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0
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191
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September 11, 2023
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scVI reproducibility seed issue
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2
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443
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September 7, 2023
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Problems importing scvi [Windows]
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22
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4345
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August 29, 2023
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TypeError when trying to set up scvi.model.TOTALVI()
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2
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248
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August 29, 2023
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Loading an scVI model from a pytorch lightning checkpoint
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3
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481
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August 29, 2023
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Increase number of CPU cores for vae.train() in scvi?
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3
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440
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August 28, 2023
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Different DEG results after loading .h5ad
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0
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209
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August 19, 2023
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Differential expression analysis
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2
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330
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August 17, 2023
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What is the best way to extract a "full" batch effect corrected count matrix from scVI model?
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4
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1782
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August 16, 2023
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DestVI Tensor Nan Error
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6
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1084
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August 4, 2023
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Sparse matrix error using totalVI integration
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1
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250
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August 4, 2023
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How to setseed in R?
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0
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165
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July 31, 2023
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