|
scVI: effect of unbalanced number of cells in batches
|
|
1
|
56
|
November 27, 2024
|
|
Zero value with scvi normalisation
|
|
1
|
36
|
November 27, 2024
|
|
Getting the parameters and their names of scVI
|
|
3
|
398
|
November 27, 2024
|
|
Scvi-tools: different DEGs when comparing same data
|
|
2
|
81
|
November 19, 2024
|
|
Error training MrVI: Backend 'cuda' failed to initialize
|
|
2
|
107
|
November 18, 2024
|
|
Integrating different tissues with scVI
|
|
3
|
149
|
November 15, 2024
|
|
Integration with or without covariate
|
|
1
|
72
|
November 11, 2024
|
|
scVI 21618 problem
|
|
5
|
240
|
November 7, 2024
|
|
Iteration consumes memory
|
|
5
|
70
|
November 7, 2024
|
|
Inconsistency of scvi/SOLO in predicting doublets?
|
|
5
|
37
|
November 7, 2024
|
|
Why totalvi can be used as denoising data?
|
|
1
|
57
|
November 7, 2024
|
|
Documentation for training with multiple GPUs
|
|
4
|
285
|
November 6, 2024
|
|
New scvi-tools version using SOLO returns probabilities, how to return logits like in version 1.1.2
|
|
7
|
111
|
July 2, 2024
|
|
Autotune failed due to "h5py objects cannot be pickled"
|
|
4
|
93
|
October 23, 2024
|
|
Transferring lables from refrence dataset to query dataset with a more diverse cell population using scANVI
|
|
8
|
129
|
October 17, 2024
|
|
SCANVI inferred cell types don't make sense
|
|
1
|
88
|
October 17, 2024
|
|
Using low precision matrix multiplication to boost performance
|
|
6
|
268
|
October 17, 2024
|
|
Model Training got only 2 epochs
|
|
4
|
163
|
October 14, 2024
|
|
Trouble integrating my dataset into a reference dataset
|
|
16
|
289
|
October 11, 2024
|
|
Is it possible to add extra covariate categories to a trained SCVI model?
|
|
3
|
78
|
October 4, 2024
|
|
Error in MrVI differential abundance
|
|
1
|
54
|
September 27, 2024
|
|
Scale for predicted vs observed plot in SCVI-SCANVI mapping?
|
|
2
|
28
|
September 25, 2024
|
|
scVI with large datasets
|
|
4
|
294
|
September 24, 2024
|
|
ZeroDivisionError using scvi-tools
|
|
15
|
134
|
September 23, 2024
|
|
Embedding number for visualization
|
|
10
|
74
|
September 23, 2024
|
|
scArches with multiple covariates
|
|
9
|
750
|
September 22, 2024
|
|
Ambient RNA removal before TotalVI?
|
|
1
|
58
|
September 22, 2024
|
|
scVI reproducibility seed issue
|
|
4
|
866
|
September 19, 2024
|
|
SCANVI: Label transfer from in vivo reference to in vitro model?
|
|
4
|
690
|
September 15, 2024
|
|
[Usage clarification] Should the .obs in query and reference be exactly the same?
|
|
2
|
28
|
September 13, 2024
|