Request for an end-to-end ResolVI tutorial on Visium HD cell segmentation data

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1

Dear ResolVI developers,

Thank you for developing such a great tool as ResolVI! I am trying to use ResolVI on my Visium HD data. My data has undergone cell segmentation with ProSeg, but I find the ResolVI tutorials somewhat difficult to read, especially for data without pre-existing reference cell types. I have browsed various issues about using ResolVI, including suggestions to combine it with scVIVA. Would the authors consider creating an end-to-end analysis tutorial that starts from ProSeg results and uses ResolVI and scVIVA to complete cell type annotation? This would be very helpful for promoting these two high-resolution spatial transcriptomics algorithms!

Thanks a lot!

Yuanshui Long

2

Dear Yuanshui, thank you for raising this.

We are definitely working on such a tutorial, and an overall walkthrough of both ResolVI and scVIVA will be shown at the upcoming scverse conference workshop on scviva-tools!

3

Dear Ori Keronfeld，thank you very much, I’m really looking forward to it!

---- 回复的原邮件 ----

发件人 | Ori Kronfeldnotifications@forum11.discoursemail.com |

  • | - |
    发送日期 | 2026年10月12日 00:29 |
    收件人 | longyuanshui1231longyuanshui1231@163.com |
    主题 | scverse: Request for an end-to-end ResolVI tutorial on Visium HD cell segmentation data |

Someone replied to your post.

| ori-kron-wis
October 11 |

  • | - |

Dear Yuanshui, thank you for raising this.

We are definitely working on such a tutorial, and an overall walkthrough of both ResolVI and scVIVA will be shown at the upcoming scverse conference workshop on scviva-tools!