Hi there, I am trying to follow the tutorial here:
I basically want to take the census data and query my own dataset against all the census data. I am running into the following error when I try to do the tutorial’s step
model.load_model(adata=adata[adata.obs["is_primary_data"]].copy())
ValueError: It appears you are trying to load a non-minified model with minified adata
This seems like maybe it’s an issue that was introduced in a recent scvi-tools update? The tutorial specifically says that we are going to use minified adata with a non-minified model, so the fact that scvi-tools is disallowing it is odd.
As another question, do you have a specific tutorial handling best practices for querying the cellxgene-census data with my own dataset? I see it for the lung data, but I don’t know if there is anything specific that needs to be done for the cellxgene. Thank you!