Hi,
I’m using google colab. I tried to save the umap by:
scanpy.pl.umap(anndata, save = ‘/content/drive/MyDrive/somepic.png’)
However, it failed to save the image and returned:
FileNotFoundError: [Errno 2] No such file or directory: ‘figures/show/content/drive/MyDrive/somepic.png’
When I directly enter:
scanpy.pl.umap(anndata, save = True)
It created a parallel figure folder from my google drive/content folder and returned:
saving figure to file figures/show.pdf
Does anyone have any solution to change the default directory and file extension (from .pdf to .png)?
Thanks in advance