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Confused about hyperparam tuning in scVI
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1
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287
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April 25, 2024
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Scvi model training after sub-clustering
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1
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203
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April 25, 2024
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scvi.model.SCVI input values
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1
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252
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April 23, 2024
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Environment recipes for scVI autotune and scIB-metrics Benchmarker
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0
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124
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April 7, 2024
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scRNA-seq batch correction for DestVI
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2
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161
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April 3, 2024
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Interpreting model history curves
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1
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389
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March 23, 2024
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Remove outliers from trained scVI model
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3
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168
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March 23, 2024
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Questions about reference mapping
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1
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303
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March 23, 2024
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Extracting Normalized Expression from Trained Model on Variable Subset
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2
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168
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March 14, 2024
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Access to each training example's original index in the input Anndata object
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0
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124
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March 12, 2024
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How to interpret the latent space in scVI
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6
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1110
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March 5, 2024
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Explicit Access to the Training Set During scVI Training
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0
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112
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March 4, 2024
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Unexpected Effect of Augmentations on scVI Batch Integration
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0
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330
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March 2, 2024
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Scvi performance on nvidia h100 vs a100
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4
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231
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March 1, 2024
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Help on MultiVI for data modality
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0
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151
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February 29, 2024
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Incorporating augmentations (per batch) for scVI training
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11
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345
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February 28, 2024
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Loading model.pt in R
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0
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112
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February 21, 2024
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Reloading saved model gives different results
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7
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367
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February 20, 2024
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Clustering with X_scVI after removing doublets
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0
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161
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February 20, 2024
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Preserving biological variability in scVI sample integration
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4
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687
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February 16, 2024
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Trouble with scvi environment from reticulate in R to run seurat pipeline
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1
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523
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February 16, 2024
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How to compute the integration metrics
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1
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168
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February 16, 2024
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Error when training model on M3 Max MPS
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5
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979
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February 16, 2024
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Batch correction using scvI on multiple datasets + hyperparameter tuning of an scvI model
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1
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225
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February 16, 2024
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Running totalVI by batch
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1
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156
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February 16, 2024
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Failure to remove a batch_key/ effect of number of LVs
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6
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369
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February 9, 2024
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Scvi and subtyping
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1
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351
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February 9, 2024
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How to save intermediate checkpoints?
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3
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386
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February 3, 2024
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Using a model with categorical_covariate_key instead of batch_key
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2
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480
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February 1, 2024
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GIMVI, label specification for single cell and spatial data
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0
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219
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January 28, 2024
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