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Iteration consumes memory
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5
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233
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November 7, 2024
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Inconsistency of scvi/SOLO in predicting doublets?
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5
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158
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November 7, 2024
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Why totalvi can be used as denoising data?
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1
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166
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November 7, 2024
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New scvi-tools version using SOLO returns probabilities, how to return logits like in version 1.1.2
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7
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283
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July 2, 2024
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Autotune failed due to "h5py objects cannot be pickled"
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4
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211
|
October 23, 2024
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Transferring lables from refrence dataset to query dataset with a more diverse cell population using scANVI
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8
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332
|
October 17, 2024
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SCANVI inferred cell types don't make sense
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1
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199
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October 17, 2024
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Using low precision matrix multiplication to boost performance
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6
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834
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October 17, 2024
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Model Training got only 2 epochs
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4
|
437
|
October 14, 2024
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Trouble integrating my dataset into a reference dataset
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16
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728
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October 11, 2024
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Is it possible to add extra covariate categories to a trained SCVI model?
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3
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262
|
October 4, 2024
|
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Error in MrVI differential abundance
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1
|
117
|
September 27, 2024
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Scale for predicted vs observed plot in SCVI-SCANVI mapping?
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2
|
99
|
September 25, 2024
|
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scVI with large datasets
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4
|
585
|
September 24, 2024
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ZeroDivisionError using scvi-tools
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15
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481
|
September 23, 2024
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Embedding number for visualization
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10
|
346
|
September 23, 2024
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scArches with multiple covariates
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9
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1066
|
September 22, 2024
|
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Ambient RNA removal before TotalVI?
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1
|
181
|
September 22, 2024
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scVI reproducibility seed issue
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4
|
1138
|
September 19, 2024
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SCANVI: Label transfer from in vivo reference to in vitro model?
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4
|
803
|
September 15, 2024
|
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[Usage clarification] Should the .obs in query and reference be exactly the same?
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2
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113
|
September 13, 2024
|
|
How is the scArches scvi/scanvi pipeline different from the one on SCVI tutorials?
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0
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226
|
September 13, 2024
|
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Weird UMAP after running scVI
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6
|
531
|
September 12, 2024
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What to do when the query dataset has different genes from the reference?
|
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4
|
267
|
September 4, 2024
|
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Autotune on custom model class
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|
4
|
248
|
August 30, 2024
|
|
Doublet removal: solo model train error
|
|
13
|
385
|
August 29, 2024
|
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Understanding `differential_expression()` and lvm-DE
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|
3
|
277
|
August 28, 2024
|
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Pre-defined validation data
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|
1
|
82
|
August 27, 2024
|
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SCVI and SCANVI for label transfer how to assess accuracy?
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3
|
442
|
August 20, 2024
|
|
Error when using scVI.model.train
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|
2
|
247
|
August 19, 2024
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