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Scvi importing problems
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3
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398
|
March 9, 2023
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Don't extend labels for query data
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1
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269
|
March 6, 2023
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Mini-batching error after registering MuData .varm field with custom scvi-tools model
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1
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255
|
March 1, 2023
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Model which can work on binary data
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1
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213
|
February 27, 2023
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How to interpret vae.train() progress bar?
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1
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325
|
February 23, 2023
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Which values do you use to visualise gene expression?
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3
|
764
|
February 21, 2023
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Kernel dying when using scvi to train a model (m1 mac)
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0
|
353
|
February 21, 2023
|
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Scib_metrics run time
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5
|
537
|
February 19, 2023
|
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Minimum number of cells for scVI?
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2
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275
|
February 15, 2023
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scVI access the model
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4
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364
|
February 9, 2023
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Scvi-toools based model does not log metrics on every step
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3
|
346
|
February 5, 2023
|
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Unstable result
|
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0
|
260
|
February 1, 2023
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Transform_batch parameter of scVI's get_normalized_expression
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2
|
495
|
January 28, 2023
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Differential expression filtering in scVI
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0
|
265
|
January 26, 2023
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Log metrics from a Pyro model
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2
|
199
|
January 26, 2023
|
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Ambient RNA Filtering with scAR prior to scVI
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1
|
512
|
January 23, 2023
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Re-integrate after removing low-quality cells?
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2
|
383
|
January 23, 2023
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Best way to rank genes for GSEA analysis
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1
|
489
|
January 23, 2023
|
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Writing/reading scANVI model error?
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3
|
775
|
January 23, 2023
|
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Multiple training sets with scVI?
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1
|
341
|
January 20, 2023
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"Vanilla" vs "Change" Mode in Differential Expression
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2
|
265
|
January 17, 2023
|
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Dimensionality reduction of 10x visium spatial datasets
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1
|
349
|
January 15, 2023
|
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Error when using 'get_normalized_expression'
|
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0
|
339
|
January 5, 2023
|
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DestVI scRNA-seq considerations
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3
|
346
|
January 5, 2023
|
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Is it possible to do second round integration via X_normalized_scVI normalized counts?
|
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0
|
321
|
January 5, 2023
|
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Selection of HVG in scVI
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3
|
781
|
December 20, 2022
|
|
About VAE._regular_inference()
|
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3
|
360
|
December 19, 2022
|
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Cannot transfer setup without `extend_categories = True`
|
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2
|
732
|
December 15, 2022
|
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DE between conditions in a cluster
|
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4
|
434
|
December 14, 2022
|
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Getting the parameters and their names of scVI
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|
1
|
321
|
December 10, 2022
|