ImportError Traceback (most recent call last)
Cell In[6], line 1
----> 1 import scviFile ~/anaconda3/scvi-env/lib/python3.10/site-packages/scvi/init.py:11
8 from ._settings import settings
10 # this import needs to come after prior imports to prevent circular import
—> 11 from . import autotune, data, model, external, utils, criticism
13 from importlib.metadata import version
15 package_name = “scvi-tools”File ~/anaconda3/scvi-env/lib/python3.10/site-packages/scvi/autotune/init.py:1
----> 1 from ._manager import TuneAnalysis, TunerManager
2 from ._tuner import ModelTuner
3 from ._types import Tunable, TunableMixinFile ~/anaconda3/scvi-env/lib/python3.10/site-packages/scvi/autotune/_manager.py:23
21 from scvi._decorators import dependencies
22 from scvi._types import AnnOrMuData
—> 23 from scvi.data._constants import _SETUP_ARGS_KEY, _SETUP_METHOD_NAME
24 from scvi.model.base import BaseModelClass
25 from scvi.utils import InvalidParameterErrorFile ~/anaconda3/scvi-env/lib/python3.10/site-packages/scvi/data/init.py:3
1 from anndata import read_csv, read_h5ad, read_loom, read_text
----> 3 from ._anntorchdataset import AnnTorchDataset
4 from ._datasets import (
5 annotation_simulation,
6 brainlarge_dataset,
(…)
22 synthetic_iid,
23 )
24 from ._manager import AnnDataManager, AnnDataManagerValidationCheckFile ~/anaconda3/scvi-env/lib/python3.10/site-packages/scvi/data/_anntorchdataset.py:7
5 import numpy as np
6 import pandas as pd
----> 7 from anndata._core.sparse_dataset import SparseDataset
8 from scipy.sparse import issparse
9 from torch.utils.data import DatasetImportError: cannot import name ‘SparseDataset’ from ‘anndata._core.sparse_dataset’ (/Users/marwansharawy/anaconda3/scvi-env/lib/python3.10/site-packages/anndata/_core/sparse_dataset.py)
this is the packages version in my enviroment
conda list
packages in environment at /Users/marwansharawy/anaconda3/scvi-env:
Name Version Build Channel
absl-py 2.0.0 pyhd8ed1ab_0 conda-forge
anndata 0.10.1 pyhd8ed1ab_0 conda-forge