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Predicting of unassigned cells using scANVI
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0
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259
|
December 10, 2023
|
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Error running ModelTuner.fit
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5
|
478
|
December 8, 2023
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Differential gene expression - normalize gene values?
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0
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215
|
December 6, 2023
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Create SpatialData from Akoya Phenocycler qptiff
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5
|
564
|
December 5, 2023
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scVI integration with all genes
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0
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281
|
December 5, 2023
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Suggestion on parameters for training scvi model
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3
|
1570
|
December 4, 2023
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Error when saving adata with adata.write_h5ad(): "Above error raised while writing key 'names' of to /"
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2
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2110
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December 3, 2023
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scPoli implementation in dcvi-tools
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2
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149
|
December 1, 2023
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Interpretation of Scripy's define_clonotype_clusters for B-cell receptors
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4
|
147
|
December 1, 2023
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When mutli-gpu support is planned on scanvi?
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3
|
234
|
December 1, 2023
|
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UserWarning: No data for colormapping provided via 'c'. Parameters 'cmap' will be ignored
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8
|
7586
|
December 1, 2023
|
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Nested batch effects with scvi
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3
|
350
|
November 29, 2023
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Scvi for developmental data
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4
|
236
|
November 29, 2023
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What input datasets are appropriate for Destvi
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3
|
179
|
November 29, 2023
|
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Compatibility between scVI and SCENIC
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|
10
|
661
|
November 28, 2023
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MultiVI size factor for multiple modalities
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0
|
207
|
November 24, 2023
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Using Milo in Pertpy: how to install the statmod R package for pertpy?
|
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2
|
265
|
November 23, 2023
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Dispersed cells in umap
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0
|
170
|
November 22, 2023
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Setting num_workers in DataLoader for improving train performance
|
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2
|
2312
|
November 21, 2023
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Error in Fine-tuning scANVI Hyperparameters from Pretrained scVI Model
|
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2
|
388
|
November 20, 2023
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Vae_q.latent_space_classifer_ not found in totalVI CITE-seq reference mapping tutorial
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3
|
203
|
November 20, 2023
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Save layer back to spatialdata from napari
|
|
6
|
333
|
November 15, 2023
|
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Input to scvi encoder
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4
|
497
|
November 14, 2023
|
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Multi-omics scANVI
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|
1
|
205
|
November 14, 2023
|
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Methods of calculating graphs
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0
|
233
|
November 9, 2023
|
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Raw count input for scVI cell clustering
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2
|
340
|
November 8, 2023
|
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Scanpy equivalent of Seurat's FindConservedMarkers
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0
|
298
|
November 8, 2023
|
|
Correlation matrix values
|
|
0
|
368
|
November 8, 2023
|
|
Error in Atlas-level-integration-of-lung-data Tutorial
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|
4
|
395
|
November 1, 2023
|
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Reading matrix.mtx with "real" number format
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0
|
345
|
October 29, 2023
|