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Error in Atlas-level-integration-of-lung-data Tutorial
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4
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395
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November 1, 2023
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Reading matrix.mtx with "real" number format
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0
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345
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October 29, 2023
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Contour Plot based on gene expression or score
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0
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457
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October 26, 2023
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Increase scVI integration speed
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5
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996
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October 24, 2023
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scVI integration using two batch keys
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5
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1144
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October 24, 2023
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Loading ATAC dataset
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3
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631
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October 23, 2023
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RuntimeWarning: The lr scheduler dict contains the key(s)
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0
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234
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October 23, 2023
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How to show the cells on my umap projection based on barcodes
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2
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543
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October 12, 2023
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Is it possible to get the saved model from h5ad file?
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3
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472
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October 17, 2023
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Mrvi error because of LossRecorder to LossOutput change
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1
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244
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October 12, 2023
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Model doesn't contain validation metrics
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7
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572
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October 12, 2023
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Run scanpy.pp.neighbors and UMAP on a different layer other than X?
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2
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867
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October 11, 2023
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Enviroment.yml file? scvi installation problems
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8
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1045
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October 11, 2023
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Error with import scvi _
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1
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792
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October 10, 2023
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Error message cannot import name 'set_verbosity' from 'scvi._settings' when importing scvi
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6
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1282
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October 9, 2023
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Query about transfer learning / scArches in SCVI
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0
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252
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October 7, 2023
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Help with analyzing BD Rhapsody?
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3
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244
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October 4, 2023
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Problem with airr data loading
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11
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673
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October 3, 2023
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Specify prefix with regular expression in scanpy.read_10x_mtx()
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0
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292
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October 2, 2023
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How to ScanPy cluster already CPM normalized/log transformed data?
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6
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1238
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October 1, 2023
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Expression_cutoff optiion from scanpy.pl.dotplot function
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0
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210
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September 28, 2023
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Pl.ligrec error in latest version of squidpy
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4
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626
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September 27, 2023
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Re-integration after subseting cluster
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2
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577
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September 26, 2023
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Deconvolute spatial (Visium) using a bulk RNA-seq dataset
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1
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289
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September 26, 2023
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Sequential scArches
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0
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268
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September 24, 2023
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Gene shows up in dotplot, but it's not present in var_names
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1
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477
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September 16, 2023
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How to install solo-sc or use hashsolo from scvi?
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4
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690
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September 11, 2023
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Get var_names used for training SCVI model
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0
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296
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September 11, 2023
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Normalization on rpkm data
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0
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233
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September 11, 2023
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Is it possible to include leading edge genes in decoupler.run_gsea output?
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3
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544
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September 8, 2023
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