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How to save intermediate checkpoints?
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3
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296
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February 3, 2024
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Using a model with categorical_covariate_key instead of batch_key
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2
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201
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February 1, 2024
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Plots shifted when using scanpy in R markdown
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0
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61
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February 1, 2024
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AttributeError: module 'jax' has no attribute 'Device'
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9
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3484
|
January 31, 2024
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How to compare different parameter sets using the validation loss?
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3
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169
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January 31, 2024
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GIMVI, label specification for single cell and spatial data
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0
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114
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January 28, 2024
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Preparing data for training of a classifier while preserving biological signal
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0
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96
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January 27, 2024
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TCR Metrics for Pairwise Distance Matrix
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3
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120
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January 26, 2024
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Clonotype_network
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2
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95
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January 26, 2024
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Bus error when writing concatenated adata
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1
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108
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January 26, 2024
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Trying to read custom genome using sc.read_10x_h5
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0
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117
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January 26, 2024
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Multi_chain and extra_chains
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1
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61
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January 26, 2024
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Var counts 0 after gene filtering
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1
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108
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January 25, 2024
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Label Transfer Discrepancy in scANVI Model Training
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2
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153
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January 22, 2024
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Importing cellcharter
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1
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72
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January 22, 2024
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Differential expression and rarely expressed genes
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1
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139
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January 20, 2024
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Converting view of a backed anndata object into non-view/non-backed
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2
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168
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January 16, 2024
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Heatmap cannot be assigned as a subplot
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1
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154
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January 16, 2024
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Umap shapes different for the same dataset
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1
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118
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January 15, 2024
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Counts in layers is zero after ad.concat
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2
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107
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January 15, 2024
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Encountering Error in Label Transfer : Query Dataset Slightly Larger than Reference Dataset
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3
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120
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January 11, 2024
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Sorting annData object by observations or variables?
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1
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647
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January 10, 2024
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scVI dropout, need for it?
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2
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145
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January 10, 2024
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Mismatch between MAST DE results and dotplot
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0
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74
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January 9, 2024
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Pl.dotplot : legend(mean expression in group) number is so large
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1
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233
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January 9, 2024
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Attribute Error while training simplescvi on tutorial lung data. Differences to full scvi?
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2
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119
|
January 9, 2024
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Adding cycle consistency loss and VampPrior to scVI
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2
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97
|
January 9, 2024
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Remove samples/rows from anndata
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5
|
3435
|
January 9, 2024
|
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Any existing effort to port squidpy functionalities to R?
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0
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100
|
January 7, 2024
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Denoising/remove ambient RNA with scAR then scvi modeling?
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3
|
172
|
January 6, 2024
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